PDCD2 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	15 studies	22% ± 5%	Explore
B cell	13 studies	22% ± 7%	Explore
CD4-positive, alpha-beta T cell	13 studies	21% ± 7%	Explore
CD8-positive, alpha-beta T cell	13 studies	22% ± 7%	Explore
regulatory T cell	10 studies	18% ± 2%	Explore
T cell	9 studies	20% ± 3%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	9 studies	21% ± 5%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	9 studies	22% ± 8%	Explore
mature NK T cell	9 studies	18% ± 4%	Explore
gamma-delta T cell	9 studies	24% ± 12%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	23% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	23% ± 5%	Explore
memory B cell	8 studies	19% ± 2%	Explore
naive B cell	7 studies	18% ± 2%	Explore
mucosal invariant T cell	7 studies	18% ± 1%	Explore
CD8-positive, alpha-beta memory T cell	6 studies	22% ± 9%	Explore
endothelial cell	6 studies	26% ± 8%	Explore
plasmacytoid dendritic cell	6 studies	27% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	23% ± 7%	Explore
epithelial cell	5 studies	41% ± 16%	Explore
basal cell	5 studies	29% ± 15%	Explore
ciliated cell	5 studies	29% ± 7%	Explore
T follicular helper cell	5 studies	18% ± 2%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	21% ± 4%	Explore
non-classical monocyte	4 studies	31% ± 11%	Explore
classical monocyte	4 studies	28% ± 10%	Explore
conventional dendritic cell	4 studies	37% ± 18%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	25% ± 9%	Explore
hematopoietic precursor cell	3 studies	39% ± 12%	Explore
plasma cell	3 studies	30% ± 14%	Explore
plasmablast	3 studies	54% ± 5%	Explore
pancreatic A cell	3 studies	25% ± 5%	Explore
exhausted T cell	3 studies	26% ± 14%	Explore
hematopoietic stem cell	3 studies	19% ± 3%	Explore
immature B cell	3 studies	19% ± 4%	Explore
precursor B cell	3 studies	20% ± 1%	Explore
germinal center B cell	3 studies	20% ± 3%	Explore
innate lymphoid cell	3 studies	20% ± 3%	Explore
glutamatergic neuron	3 studies	28% ± 10%	Explore
dendritic cell	3 studies	40% ± 21%	Explore
goblet cell	3 studies	21% ± 5%	Explore
intestinal crypt stem cell	3 studies	22% ± 0%	Explore
neuron	3 studies	27% ± 15%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	9 studies	24% ± 9%	Explore
lung	5 studies	24% ± 10%	Explore
pancreas	3 studies	27% ± 6%	Explore
brain	3 studies	22% ± 8%	Explore
liver	3 studies	27% ± 15%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	2590.12	459 / 459	100%	28.13	1118 / 1118
esophagus	100%	2322.12	1445 / 1445	100%	22.35	183 / 183
intestine	100%	2376.83	966 / 966	100%	31.24	527 / 527
lung	100%	2224.62	578 / 578	100%	23.49	1155 / 1155
ovary	100%	2111.70	180 / 180	100%	23.88	430 / 430
pancreas	100%	2375.97	328 / 328	100%	18.90	178 / 178
prostate	100%	2339.42	245 / 245	100%	26.59	502 / 502
stomach	100%	2289.54	359 / 359	100%	27.52	286 / 286
uterus	100%	2306.33	170 / 170	100%	24.77	459 / 459
brain	100%	1464.64	2639 / 2642	100%	20.93	705 / 705
thymus	100%	2513.64	653 / 653	100%	25.06	604 / 605
bladder	100%	2497.48	21 / 21	100%	26.84	503 / 504
kidney	100%	2237.51	89 / 89	100%	17.75	899 / 901
liver	100%	1344.60	226 / 226	100%	13.06	404 / 406
skin	100%	2478.59	1809 / 1809	99%	21.09	466 / 472
adrenal gland	100%	2332.31	258 / 258	98%	17.82	225 / 230
adipose	100%	2432.96	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	33.47	29 / 29
muscle	100%	1892.82	803 / 803	0%	0	0 / 0
spleen	100%	2639.71	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	20.84	45 / 45
ureter	0%	0	0 / 0	100%	7.05	1 / 1
blood vessel	100%	2247.26	1334 / 1335	0%	0	0 / 0
heart	99%	1305.84	855 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	19.31	79 / 80
peripheral blood	91%	1626.13	844 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006915	Biological process	apoptotic process
GO_0006919	Biological process	activation of cysteine-type endopeptidase activity involved in apoptotic process
GO_1901532	Biological process	regulation of hematopoietic progenitor cell differentiation
GO_1902035	Biological process	positive regulation of hematopoietic stem cell proliferation
GO_0043065	Biological process	positive regulation of apoptotic process
GO_0070062	Cellular component	extracellular exosome
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0003677	Molecular function	DNA binding
GO_0019899	Molecular function	enzyme binding
GO_0005515	Molecular function	protein binding
GO_0046872	Molecular function	metal ion binding

IV. Literature review

[source]

Gene name	PDCD2
Protein name	Programmed cell death protein 2 (Zinc finger MYND domain-containing protein 7) (Zinc finger protein Rp-8) PDCD2 protein Programmed cell death 2
Synonyms	RP8 ZMYND7 hCG_2029505
Description	FUNCTION: May be a DNA-binding protein with a regulatory function. May play an important role in cell death and/or in regulation of cell proliferation.
Accessions	J3QK82 ENST00000392090.6 [Q16342-3] ENST00000167218.9 ENST00000453163.6 [Q16342-4] F5GWT2 H0YFZ5 H0YFS8 ENST00000541970.6 [Q16342-1] Q6NW24 ENST00000544866.5 ENST00000537445.5 [Q16342-5] A0A087WYJ3 ENST00000545869.5 Q16342 ENST00000614056.4 F5H4V9 ENST00000544755.1 H0YFM2 ENST00000443345.2 [Q16342-2] ENST00000539212.5 ENST00000544336.5 ENST00000542896.5

PDCD2 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review