Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 17 studies | 30% ± 12% | |
B cell | 5 studies | 16% ± 1% | |
goblet cell | 4 studies | 24% ± 7% | |
alveolar macrophage | 4 studies | 20% ± 7% | |
classical monocyte | 3 studies | 22% ± 4% | |
adipocyte | 3 studies | 21% ± 4% | |
monocyte | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 10274.10 | 328 / 328 | 100% | 22.00 | 178 / 178 |
prostate | 100% | 9257.93 | 245 / 245 | 100% | 51.21 | 502 / 502 |
thymus | 100% | 6515.64 | 653 / 653 | 100% | 23.66 | 605 / 605 |
esophagus | 100% | 4183.93 | 1444 / 1445 | 100% | 19.49 | 183 / 183 |
stomach | 100% | 10159.25 | 359 / 359 | 100% | 20.24 | 285 / 286 |
intestine | 100% | 5718.42 | 966 / 966 | 99% | 17.13 | 524 / 527 |
lung | 100% | 6939.65 | 578 / 578 | 99% | 20.05 | 1147 / 1155 |
breast | 100% | 7136.88 | 459 / 459 | 99% | 25.44 | 1109 / 1118 |
skin | 100% | 5098.07 | 1809 / 1809 | 99% | 24.16 | 468 / 472 |
ovary | 100% | 10508.91 | 180 / 180 | 99% | 19.27 | 426 / 430 |
liver | 100% | 3444.92 | 226 / 226 | 99% | 14.19 | 402 / 406 |
kidney | 100% | 3397.22 | 89 / 89 | 99% | 17.77 | 892 / 901 |
brain | 99% | 3399.72 | 2611 / 2642 | 100% | 24.67 | 705 / 705 |
bladder | 100% | 4886.29 | 21 / 21 | 98% | 13.97 | 493 / 504 |
uterus | 100% | 6918.65 | 170 / 170 | 97% | 12.92 | 445 / 459 |
adrenal gland | 100% | 4432.24 | 258 / 258 | 96% | 21.37 | 221 / 230 |
adipose | 100% | 7463.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 20.57 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.81 | 29 / 29 |
spleen | 100% | 5947.36 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.81 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.21 | 1 / 1 |
blood vessel | 100% | 5086.45 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2707.71 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 3289.40 | 848 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3564.79 | 906 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000902 | Biological process | cell morphogenesis |
GO_0044342 | Biological process | type B pancreatic cell proliferation |
GO_0050658 | Biological process | RNA transport |
GO_0061178 | Biological process | regulation of insulin secretion involved in cellular response to glucose stimulus |
GO_0009749 | Biological process | response to glucose |
GO_0003323 | Biological process | type B pancreatic cell development |
GO_0042593 | Biological process | glucose homeostasis |
GO_0006401 | Biological process | RNA catabolic process |
GO_0005764 | Cellular component | lysosome |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0003677 | Molecular function | DNA binding |
GO_0035612 | Molecular function | AP-2 adaptor complex binding |
GO_0035650 | Molecular function | AP-1 adaptor complex binding |
GO_0051032 | Molecular function | nucleic acid transmembrane transporter activity |
GO_0003725 | Molecular function | double-stranded RNA binding |
GO_0051033 | Molecular function | RNA transmembrane transporter activity |
Gene name | SIDT2 |
Protein name | SID1 transmembrane family member 2 (SID1 transmembrane family, member 2, isoform CRA_k) SIDT2 protein SID1 transmembrane family member 2 SID1 transmembrane family member 2 (SID1 transmembrane family, member 2, isoform CRA_a) |
Synonyms | PSEC0072 UNQ685/PRO1325 hCG_2039721 CGI-40 |
Description | FUNCTION: Mediates the translocation of RNA and DNA across the lysosomal membrane during RNA and DNA autophagy (RDA), a process in which RNA or DNA is directly imported into lysosomes in an ATP-dependent manner, and degraded . Involved in the uptake of single-stranded oligonucleotides by living cells, a process called gymnosis . In vitro, mediates the uptake of linear DNA more efficiently than that of circular DNA, but exhibits similar uptake efficacy toward RNA and DNA. Binds long double-stranded RNA (dsRNA) (500 - 700 base pairs), but not dsRNA shorter than 100 bp (By similarity). . |
Accessions | G3V172 ENST00000532062.1 ENST00000532960.5 ENST00000324225.9 [Q8NBJ9-1] F5H8L4 ENST00000525478.5 E9PPN9 ENST00000278951.11 ENST00000531353.1 E9PME7 C9JBG5 L7X6U2 ENST00000628876.2 Q8NBJ9 Q24JR2 Q1RMF0 H0YEI3 E9PMC3 ENST00000524842.5 ENST00000431081.6 |