Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 29% ± 13% | |
macrophage | 13 studies | 32% ± 15% | |
glutamatergic neuron | 11 studies | 37% ± 20% | |
astrocyte | 11 studies | 31% ± 13% | |
microglial cell | 11 studies | 36% ± 13% | |
oligodendrocyte | 11 studies | 36% ± 12% | |
GABAergic neuron | 10 studies | 44% ± 21% | |
oligodendrocyte precursor cell | 10 studies | 38% ± 10% | |
epithelial cell | 7 studies | 29% ± 8% | |
pericyte | 7 studies | 27% ± 16% | |
interneuron | 6 studies | 57% ± 19% | |
retinal cone cell | 6 studies | 36% ± 23% | |
dendritic cell | 6 studies | 23% ± 4% | |
neuron | 5 studies | 45% ± 15% | |
plasma cell | 5 studies | 33% ± 8% | |
endothelial cell of lymphatic vessel | 5 studies | 29% ± 5% | |
monocyte | 5 studies | 29% ± 5% | |
fibroblast | 5 studies | 20% ± 4% | |
type II pneumocyte | 5 studies | 23% ± 6% | |
retinal rod cell | 4 studies | 44% ± 29% | |
myeloid cell | 4 studies | 30% ± 8% | |
mast cell | 4 studies | 25% ± 4% | |
smooth muscle cell | 4 studies | 18% ± 2% | |
goblet cell | 4 studies | 27% ± 12% | |
adipocyte | 4 studies | 18% ± 2% | |
GABAergic interneuron | 3 studies | 42% ± 10% | |
granule cell | 3 studies | 43% ± 11% | |
progenitor cell | 3 studies | 35% ± 11% | |
GABAergic amacrine cell | 3 studies | 37% ± 13% | |
glycinergic amacrine cell | 3 studies | 33% ± 10% | |
hepatocyte | 3 studies | 30% ± 9% | |
enteroendocrine cell | 3 studies | 26% ± 8% | |
B cell | 3 studies | 28% ± 8% | |
T cell | 3 studies | 18% ± 1% | |
alveolar macrophage | 3 studies | 34% ± 8% | |
ciliated cell | 3 studies | 22% ± 8% | |
natural killer cell | 3 studies | 20% ± 3% | |
type I pneumocyte | 3 studies | 20% ± 4% | |
lymphocyte | 3 studies | 25% ± 7% | |
transit amplifying cell | 3 studies | 37% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 449.10 | 1445 / 1445 | 99% | 3.51 | 181 / 183 |
brain | 100% | 428.04 | 2630 / 2642 | 99% | 2.92 | 697 / 705 |
adrenal gland | 100% | 581.44 | 258 / 258 | 96% | 3.29 | 221 / 230 |
stomach | 100% | 429.99 | 359 / 359 | 95% | 3.34 | 272 / 286 |
breast | 100% | 546.72 | 459 / 459 | 94% | 3.06 | 1051 / 1118 |
lung | 100% | 577.49 | 578 / 578 | 94% | 2.29 | 1080 / 1155 |
intestine | 100% | 615.98 | 966 / 966 | 93% | 2.73 | 492 / 527 |
prostate | 100% | 420.29 | 244 / 245 | 94% | 2.81 | 470 / 502 |
pancreas | 99% | 302.48 | 325 / 328 | 94% | 2.38 | 167 / 178 |
thymus | 100% | 500.85 | 653 / 653 | 91% | 2.07 | 551 / 605 |
uterus | 100% | 472.62 | 170 / 170 | 88% | 2.23 | 402 / 459 |
bladder | 100% | 466.76 | 21 / 21 | 88% | 2.08 | 441 / 504 |
kidney | 100% | 446.70 | 89 / 89 | 85% | 2.09 | 770 / 901 |
skin | 100% | 792.27 | 1809 / 1809 | 84% | 2.50 | 396 / 472 |
ovary | 100% | 567.87 | 180 / 180 | 69% | 1.34 | 297 / 430 |
liver | 100% | 309.32 | 226 / 226 | 51% | 1.18 | 209 / 406 |
adipose | 100% | 580.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 584.87 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 372.76 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 393.37 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 215.74 | 811 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 2.43 | 38 / 45 |
peripheral blood | 82% | 446.57 | 760 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 1.28 | 20 / 29 |
eye | 0% | 0 | 0 / 0 | 33% | 0.57 | 26 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_1990226 | Molecular function | histone methyltransferase binding |
GO_0005515 | Molecular function | protein binding |
Gene name | LCORL |
Protein name | Ligand-dependent nuclear receptor corepressor-like protein (LCoR-like protein) Ligand dependent nuclear receptor corepressor like Ligand dependent nuclear receptor corepressor like (Transcription factor MLR1, isoform CRA_b) |
Synonyms | MLR1 hCG_1660774 |
Description | FUNCTION: May act as transcription activator that binds DNA elements with the sequence 5'-CCCTATCGATCGATCTCTACCT-3'. May play a role in spermatogenesis (By similarity). . |
Accessions | ENST00000675927.1 C9JI46 ENST00000635767.2 ENST00000676061.1 A0A6Q8PFA3 ENST00000510451.5 A0A6Q8PHE0 ENST00000326877.8 [Q8N3X6-3] ENST00000382224.5 A0A6Q8PFT7 ENST00000382226.5 [Q8N3X6-1] ENST00000675605.1 ENST00000675143.1 Q8N3X6 A0A6Q8PFX9 ENST00000676180.1 A0A1B0GVP4 ENST00000674942.1 D6RA10 A0A6Q8PG24 ENST00000637787.1 ENST00000675131.1 A0A6Q8PFB4 A0A1B0GWC6 A0A6Q8PHT2 |