HNRNPDL | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	47 studies	49% ± 19%	Explore
B cell	46 studies	60% ± 20%	Explore
fibroblast	44 studies	56% ± 19%	Explore
macrophage	43 studies	46% ± 16%	Explore
natural killer cell	42 studies	61% ± 19%	Explore
T cell	40 studies	52% ± 21%	Explore
CD8-positive, alpha-beta T cell	38 studies	60% ± 20%	Explore
pericyte	35 studies	60% ± 18%	Explore
CD4-positive, alpha-beta T cell	34 studies	62% ± 20%	Explore
smooth muscle cell	32 studies	58% ± 20%	Explore
conventional dendritic cell	28 studies	62% ± 16%	Explore
regulatory T cell	27 studies	63% ± 18%	Explore
dendritic cell	26 studies	56% ± 24%	Explore
endothelial cell of lymphatic vessel	25 studies	49% ± 15%	Explore
classical monocyte	25 studies	54% ± 14%	Explore
plasmacytoid dendritic cell	25 studies	66% ± 16%	Explore
mast cell	24 studies	46% ± 19%	Explore
non-classical monocyte	24 studies	66% ± 17%	Explore
basal cell	23 studies	59% ± 19%	Explore
monocyte	22 studies	46% ± 17%	Explore
plasma cell	22 studies	45% ± 17%	Explore
mature NK T cell	22 studies	56% ± 20%	Explore
epithelial cell	22 studies	58% ± 23%	Explore
astrocyte	21 studies	37% ± 17%	Explore
memory B cell	20 studies	72% ± 12%	Explore
naive B cell	20 studies	67% ± 12%	Explore
gamma-delta T cell	18 studies	66% ± 17%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	18 studies	64% ± 17%	Explore
ciliated cell	18 studies	51% ± 21%	Explore
connective tissue cell	18 studies	64% ± 20%	Explore
CD16-negative, CD56-bright natural killer cell, human	17 studies	63% ± 20%	Explore
mucosal invariant T cell	17 studies	60% ± 22%	Explore
oligodendrocyte	17 studies	48% ± 19%	Explore
CD16-positive, CD56-dim natural killer cell, human	16 studies	68% ± 17%	Explore
oligodendrocyte precursor cell	16 studies	47% ± 23%	Explore
microglial cell	16 studies	40% ± 17%	Explore
myeloid cell	16 studies	50% ± 21%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	15 studies	70% ± 15%	Explore
myofibroblast cell	15 studies	66% ± 18%	Explore
capillary endothelial cell	14 studies	45% ± 16%	Explore
endothelial cell of vascular tree	14 studies	54% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell	13 studies	62% ± 21%	Explore
CD4-positive, alpha-beta memory T cell	13 studies	63% ± 18%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	65% ± 18%	Explore
vein endothelial cell	13 studies	53% ± 17%	Explore
type I pneumocyte	12 studies	51% ± 19%	Explore
type II pneumocyte	12 studies	46% ± 21%	Explore
secretory cell	12 studies	59% ± 16%	Explore
glutamatergic neuron	12 studies	52% ± 22%	Explore
endothelial cell of artery	12 studies	52% ± 15%	Explore
mesothelial cell	12 studies	64% ± 26%	Explore
plasmablast	11 studies	65% ± 25%	Explore
club cell	11 studies	46% ± 23%	Explore
progenitor cell	11 studies	60% ± 26%	Explore
neuron	11 studies	59% ± 25%	Explore
innate lymphoid cell	10 studies	57% ± 13%	Explore
leukocyte	10 studies	57% ± 14%	Explore
GABAergic neuron	10 studies	48% ± 21%	Explore
abnormal cell	10 studies	60% ± 19%	Explore
goblet cell	9 studies	41% ± 17%	Explore
T follicular helper cell	9 studies	58% ± 22%	Explore
adipocyte	9 studies	43% ± 14%	Explore
alveolar macrophage	8 studies	46% ± 18%	Explore
respiratory goblet cell	8 studies	41% ± 20%	Explore
effector CD8-positive, alpha-beta T cell	8 studies	63% ± 21%	Explore
interneuron	8 studies	58% ± 21%	Explore
mononuclear phagocyte	7 studies	51% ± 20%	Explore
epithelial cell of proximal tubule	7 studies	37% ± 18%	Explore
kidney loop of Henle epithelial cell	7 studies	40% ± 12%	Explore
renal alpha-intercalated cell	7 studies	46% ± 20%	Explore
retinal ganglion cell	7 studies	55% ± 30%	Explore
retinal rod cell	7 studies	33% ± 21%	Explore
hematopoietic stem cell	7 studies	75% ± 17%	Explore
precursor B cell	7 studies	74% ± 14%	Explore
immature B cell	7 studies	76% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	6 studies	57% ± 20%	Explore
ionocyte	6 studies	46% ± 9%	Explore
platelet	6 studies	34% ± 10%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	67% ± 12%	Explore
enterocyte	6 studies	32% ± 16%	Explore
erythroblast	6 studies	52% ± 28%	Explore
IgA plasma cell	6 studies	35% ± 10%	Explore
IgG plasma cell	6 studies	32% ± 13%	Explore
amacrine cell	6 studies	48% ± 21%	Explore
retinal cone cell	6 studies	43% ± 26%	Explore
lymphocyte	6 studies	51% ± 22%	Explore
cardiac muscle cell	6 studies	30% ± 8%	Explore
erythrocyte	6 studies	52% ± 21%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	73% ± 11%	Explore
hepatocyte	6 studies	38% ± 28%	Explore
CD4-positive helper T cell	5 studies	55% ± 22%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	68% ± 11%	Explore
hematopoietic precursor cell	5 studies	76% ± 25%	Explore
exhausted T cell	5 studies	65% ± 10%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	67% ± 21%	Explore
enteroendocrine cell	5 studies	59% ± 26%	Explore
intestinal crypt stem cell	5 studies	36% ± 16%	Explore
transit amplifying cell	5 studies	50% ± 23%	Explore
glial cell	5 studies	47% ± 25%	Explore
pro-B cell	5 studies	69% ± 19%	Explore
brush cell	5 studies	38% ± 20%	Explore
T-helper 17 cell	5 studies	65% ± 20%	Explore
group 3 innate lymphoid cell	5 studies	74% ± 10%	Explore
retina horizontal cell	5 studies	44% ± 21%	Explore
adventitial cell	5 studies	50% ± 16%	Explore
muscle cell	5 studies	51% ± 16%	Explore
double negative thymocyte	5 studies	75% ± 10%	Explore
intermediate monocyte	5 studies	67% ± 16%	Explore
granulocyte	5 studies	53% ± 14%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	53% ± 23%	Explore
deuterosomal cell	4 studies	39% ± 8%	Explore
duct epithelial cell	4 studies	40% ± 7%	Explore
squamous epithelial cell	4 studies	39% ± 24%	Explore
glomerular endothelial cell	4 studies	41% ± 10%	Explore
podocyte	4 studies	55% ± 28%	Explore
granule cell	4 studies	30% ± 11%	Explore
OFF-bipolar cell	4 studies	42% ± 19%	Explore
ON-bipolar cell	4 studies	42% ± 18%	Explore
Schwann cell	4 studies	57% ± 23%	Explore
retinal pigment epithelial cell	4 studies	49% ± 21%	Explore
Mueller cell	4 studies	51% ± 14%	Explore
chondrocyte	4 studies	47% ± 24%	Explore
neutrophil	4 studies	24% ± 6%	Explore
germinal center B cell	4 studies	49% ± 21%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	70% ± 2%	Explore
myoepithelial cell	4 studies	62% ± 9%	Explore
luminal cell of prostate epithelium	4 studies	36% ± 12%	Explore
megakaryocyte-erythroid progenitor cell	4 studies	66% ± 32%	Explore
mucus secreting cell	4 studies	38% ± 9%	Explore
keratinocyte	4 studies	55% ± 14%	Explore
hillock cell	3 studies	40% ± 9%	Explore
precursor cell	3 studies	77% ± 15%	Explore
monocyte-derived dendritic cell	3 studies	60% ± 25%	Explore
differentiation-committed oligodendrocyte precursor	3 studies	63% ± 16%	Explore
neural crest cell	3 studies	83% ± 18%	Explore
retinal bipolar neuron	3 studies	62% ± 18%	Explore
GABAergic interneuron	3 studies	35% ± 10%	Explore
renal principal cell	3 studies	55% ± 9%	Explore
thymocyte	3 studies	50% ± 28%	Explore
extravillous trophoblast	3 studies	61% ± 17%	Explore
placental villous trophoblast	3 studies	70% ± 16%	Explore
neuroendocrine cell	3 studies	65% ± 24%	Explore
tissue-resident macrophage	3 studies	52% ± 15%	Explore
intraepithelial lymphocyte	3 studies	50% ± 24%	Explore
rod bipolar cell	3 studies	46% ± 13%	Explore
inflammatory macrophage	3 studies	35% ± 9%	Explore
neural progenitor cell	3 studies	53% ± 26%	Explore
melanocyte	3 studies	50% ± 4%	Explore
T-helper 1 cell	3 studies	81% ± 5%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	79% ± 9%	Explore
double-positive, alpha-beta thymocyte	3 studies	86% ± 4%	Explore
progenitor cell of mammary luminal epithelium	3 studies	70% ± 2%	Explore
mural cell	3 studies	43% ± 11%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	21 studies	53% ± 19%	Explore
peripheral blood	21 studies	61% ± 20%	Explore
brain	21 studies	46% ± 19%	Explore
intestine	11 studies	50% ± 24%	Explore
eye	10 studies	45% ± 18%	Explore
kidney	9 studies	50% ± 15%	Explore
liver	7 studies	43% ± 19%	Explore
bone marrow	6 studies	42% ± 25%	Explore
lymph node	6 studies	60% ± 17%	Explore
heart	6 studies	31% ± 8%	Explore
uterus	5 studies	61% ± 20%	Explore
prostate	5 studies	46% ± 19%	Explore
breast	5 studies	54% ± 20%	Explore
placenta	4 studies	53% ± 20%	Explore
esophagus	4 studies	48% ± 28%	Explore
skin	4 studies	45% ± 16%	Explore
adipose	4 studies	48% ± 19%	Explore
pancreas	3 studies	56% ± 23%	Explore
adrenal gland	3 studies	49% ± 17%	Explore
stomach	3 studies	49% ± 31%	Explore
thymus	3 studies	67% ± 27%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	25935.70	459 / 459	100%	136.32	1118 / 1118
esophagus	100%	22053.24	1445 / 1445	100%	113.19	183 / 183
lung	100%	27318.38	578 / 578	100%	115.85	1155 / 1155
ovary	100%	34976.18	180 / 180	100%	87.39	430 / 430
pancreas	100%	14374.56	328 / 328	100%	136.88	178 / 178
uterus	100%	31912.54	170 / 170	100%	143.58	459 / 459
intestine	100%	24940.74	966 / 966	100%	102.29	526 / 527
prostate	100%	23946.85	245 / 245	100%	127.96	501 / 502
kidney	100%	19198.99	89 / 89	100%	111.12	899 / 901
brain	100%	18982.70	2636 / 2642	100%	209.50	705 / 705
thymus	100%	26540.74	653 / 653	100%	151.98	603 / 605
stomach	100%	18203.06	359 / 359	100%	93.93	285 / 286
bladder	100%	22773.52	21 / 21	99%	117.98	501 / 504
skin	100%	20972.63	1809 / 1809	99%	120.17	469 / 472
adrenal gland	100%	17157.77	258 / 258	99%	125.37	228 / 230
liver	100%	9730.25	226 / 226	98%	60.72	396 / 406
adipose	100%	23250.46	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	128.85	29 / 29
spleen	100%	25801.89	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	113.90	45 / 45
ureter	0%	0	0 / 0	100%	101.53	1 / 1
blood vessel	100%	24851.36	1334 / 1335	0%	0	0 / 0
muscle	100%	18326.46	802 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	99%	106.79	79 / 80
heart	98%	12877.03	844 / 861	0%	0	0 / 0
peripheral blood	76%	9151.02	705 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	HNRNPDL
Protein name	Heterogeneous nuclear ribonucleoprotein D like Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL) (AU-rich element RNA-binding factor) (JKT41-binding protein) (Protein laAUF1) Heterogeneous nuclear ribonucleoprotein D like (Heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b)
Synonyms	hCG_22986 HNRPDL JKTBP
Description	FUNCTION: Acts as a transcriptional regulator. Promotes transcription repression. Promotes transcription activation in differentiated myotubes (By similarity). Binds to double- and single-stranded DNA sequences. Binds to the transcription suppressor CATR sequence of the COX5B promoter (By similarity). Binds with high affinity to RNA molecules that contain AU-rich elements (AREs) found within the 3'-UTR of many proto-oncogenes and cytokine mRNAs. Binds both to nuclear and cytoplasmic poly(A) mRNAs. Binds to poly(G) and poly(A), but not to poly(U) or poly(C) RNA homopolymers. Binds to the 5'-ACUAGC-3' RNA consensus sequence. .
Accessions	A0A087WUK2 ENST00000614627.4 A0A087WU03 ENST00000507721.5 [O14979-2] ENST00000514511.1 ENST00000621267.4 [O14979-1] ENST00000630827.1 [O14979-2] ENST00000349655.8 [O14979-2] O14979 ENST00000295470.10 [O14979-1] ENST00000602300.5 [O14979-2] ENST00000502762.4 [O14979-1] ENST00000630114.2 [O14979-2]

GO_0010468	Biological process	regulation of gene expression
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0000785	Cellular component	chromatin
GO_0003677	Molecular function	DNA binding
GO_0008143	Molecular function	poly(A) binding
GO_0005515	Molecular function	protein binding
GO_0034046	Molecular function	poly(G) binding
GO_0003723	Molecular function	RNA binding

HNRNPDL report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review