Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 26% ± 9% | |
oligodendrocyte | 12 studies | 25% ± 8% | |
glutamatergic neuron | 11 studies | 35% ± 22% | |
fibroblast | 10 studies | 22% ± 5% | |
astrocyte | 10 studies | 26% ± 9% | |
pericyte | 8 studies | 21% ± 4% | |
GABAergic neuron | 8 studies | 37% ± 18% | |
interneuron | 7 studies | 34% ± 19% | |
epithelial cell | 7 studies | 34% ± 19% | |
oligodendrocyte precursor cell | 7 studies | 30% ± 9% | |
ciliated cell | 6 studies | 38% ± 18% | |
capillary endothelial cell | 5 studies | 21% ± 3% | |
podocyte | 5 studies | 39% ± 9% | |
connective tissue cell | 5 studies | 19% ± 4% | |
epithelial cell of proximal tubule | 5 studies | 28% ± 8% | |
neuron | 5 studies | 34% ± 10% | |
kidney loop of Henle epithelial cell | 4 studies | 18% ± 2% | |
retinal ganglion cell | 4 studies | 44% ± 26% | |
myofibroblast cell | 4 studies | 22% ± 4% | |
smooth muscle cell | 4 studies | 17% ± 1% | |
endothelial cell of vascular tree | 4 studies | 18% ± 2% | |
retina horizontal cell | 4 studies | 29% ± 7% | |
basal cell | 4 studies | 27% ± 7% | |
renal alpha-intercalated cell | 4 studies | 22% ± 5% | |
B cell | 3 studies | 19% ± 3% | |
conventional dendritic cell | 3 studies | 18% ± 1% | |
glomerular endothelial cell | 3 studies | 34% ± 8% | |
GABAergic interneuron | 3 studies | 21% ± 4% | |
granule cell | 3 studies | 22% ± 7% | |
microglial cell | 3 studies | 19% ± 3% | |
amacrine cell | 3 studies | 34% ± 6% | |
hepatocyte | 3 studies | 39% ± 22% | |
pancreatic ductal cell | 3 studies | 40% ± 17% | |
abnormal cell | 3 studies | 28% ± 3% | |
vein endothelial cell | 3 studies | 21% ± 2% | |
parietal epithelial cell | 3 studies | 32% ± 5% | |
secretory cell | 3 studies | 55% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 10192.47 | 180 / 180 | 100% | 78.48 | 430 / 430 |
prostate | 100% | 3832.57 | 245 / 245 | 100% | 42.57 | 502 / 502 |
brain | 100% | 4577.52 | 2642 / 2642 | 100% | 59.64 | 704 / 705 |
lung | 100% | 3159.21 | 577 / 578 | 100% | 28.32 | 1152 / 1155 |
breast | 100% | 2970.07 | 459 / 459 | 99% | 35.65 | 1112 / 1118 |
esophagus | 100% | 2874.42 | 1445 / 1445 | 99% | 28.30 | 182 / 183 |
stomach | 100% | 2776.55 | 359 / 359 | 99% | 25.98 | 284 / 286 |
intestine | 100% | 3096.67 | 966 / 966 | 99% | 26.18 | 522 / 527 |
pancreas | 100% | 2575.75 | 328 / 328 | 99% | 29.59 | 176 / 178 |
thymus | 100% | 4656.98 | 653 / 653 | 99% | 46.87 | 598 / 605 |
bladder | 100% | 3305.00 | 21 / 21 | 99% | 26.09 | 498 / 504 |
adrenal gland | 100% | 8005.74 | 258 / 258 | 99% | 36.89 | 227 / 230 |
kidney | 100% | 4246.01 | 89 / 89 | 98% | 33.19 | 886 / 901 |
uterus | 100% | 4120.88 | 170 / 170 | 98% | 26.85 | 451 / 459 |
skin | 100% | 3224.51 | 1809 / 1809 | 93% | 19.43 | 440 / 472 |
liver | 100% | 1977.73 | 226 / 226 | 71% | 12.13 | 287 / 406 |
spleen | 100% | 2898.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.83 | 1 / 1 |
blood vessel | 100% | 3247.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2466.40 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2913.83 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 2492.11 | 832 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 13.89 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 83% | 12.80 | 66 / 80 |
peripheral blood | 33% | 583.47 | 305 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0005829 | Cellular component | cytosol |
GO_0003677 | Molecular function | DNA binding |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | FBXO21 |
Protein name | F-box protein 21, isoform CRA_b (FBXO21 protein) F-box protein 21 FBXO21 protein F-box only protein 21 |
Synonyms | hCG_40351 KIAA0875 FBX21 |
Description | FUNCTION: Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. . |
Accessions | ENST00000550180.5 ENST00000548840.1 H0YIE9 O94952 H0YHF6 Q4G104 ENST00000622495.5 [O94952-1] Q8IUQ5 ENST00000330622.9 [O94952-2] |