Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 27% ± 9% | |
oligodendrocyte | 14 studies | 45% ± 15% | |
B cell | 11 studies | 24% ± 5% | |
astrocyte | 11 studies | 27% ± 11% | |
microglial cell | 11 studies | 36% ± 11% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 10% | |
GABAergic neuron | 8 studies | 39% ± 19% | |
epithelial cell | 8 studies | 34% ± 14% | |
T cell | 7 studies | 23% ± 7% | |
glutamatergic neuron | 7 studies | 40% ± 22% | |
fibroblast | 7 studies | 22% ± 5% | |
dendritic cell | 7 studies | 27% ± 13% | |
ciliated cell | 7 studies | 28% ± 10% | |
macrophage | 7 studies | 29% ± 10% | |
natural killer cell | 6 studies | 24% ± 2% | |
adipocyte | 6 studies | 18% ± 3% | |
myeloid cell | 5 studies | 20% ± 3% | |
type II pneumocyte | 5 studies | 23% ± 5% | |
interneuron | 5 studies | 41% ± 22% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 23% ± 6% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 19% ± 3% | |
CD8-positive, alpha-beta T cell | 4 studies | 20% ± 2% | |
effector memory CD8-positive, alpha-beta T cell | 4 studies | 22% ± 3% | |
neuron | 4 studies | 38% ± 17% | |
plasma cell | 4 studies | 23% ± 7% | |
retinal bipolar neuron | 4 studies | 17% ± 1% | |
lymphocyte | 4 studies | 32% ± 10% | |
monocyte | 4 studies | 29% ± 4% | |
club cell | 4 studies | 24% ± 7% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 2% | |
type I pneumocyte | 4 studies | 26% ± 5% | |
basal cell | 4 studies | 35% ± 17% | |
plasmacytoid dendritic cell | 4 studies | 21% ± 3% | |
CD4-positive, alpha-beta T cell | 3 studies | 22% ± 3% | |
classical monocyte | 3 studies | 24% ± 5% | |
GABAergic interneuron | 3 studies | 20% ± 2% | |
retinal cone cell | 3 studies | 20% ± 1% | |
glial cell | 3 studies | 26% ± 6% | |
rod bipolar cell | 3 studies | 26% ± 3% | |
hepatocyte | 3 studies | 36% ± 14% | |
abnormal cell | 3 studies | 28% ± 12% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
Schwann cell | 3 studies | 31% ± 14% | |
goblet cell | 3 studies | 41% ± 26% | |
transit amplifying cell | 3 studies | 37% ± 22% | |
granule cell | 3 studies | 25% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2526.85 | 1445 / 1445 | 100% | 14.53 | 183 / 183 |
prostate | 100% | 3277.10 | 245 / 245 | 100% | 25.45 | 502 / 502 |
breast | 100% | 2971.07 | 459 / 459 | 100% | 27.97 | 1117 / 1118 |
brain | 100% | 2211.79 | 2639 / 2642 | 99% | 13.12 | 700 / 705 |
pancreas | 100% | 1445.12 | 327 / 328 | 99% | 10.09 | 177 / 178 |
bladder | 100% | 2874.33 | 21 / 21 | 99% | 9.62 | 498 / 504 |
lung | 100% | 2447.66 | 578 / 578 | 99% | 11.86 | 1141 / 1155 |
thymus | 100% | 2437.50 | 653 / 653 | 99% | 8.49 | 596 / 605 |
ovary | 100% | 2193.29 | 180 / 180 | 98% | 9.26 | 422 / 430 |
intestine | 100% | 3871.01 | 966 / 966 | 98% | 8.97 | 516 / 527 |
stomach | 100% | 2679.65 | 359 / 359 | 98% | 11.10 | 279 / 286 |
uterus | 100% | 2359.85 | 170 / 170 | 97% | 8.85 | 445 / 459 |
liver | 100% | 1632.93 | 226 / 226 | 94% | 7.09 | 383 / 406 |
adrenal gland | 100% | 2181.26 | 258 / 258 | 94% | 6.58 | 216 / 230 |
kidney | 100% | 1774.94 | 89 / 89 | 94% | 8.62 | 846 / 901 |
skin | 100% | 3242.99 | 1808 / 1809 | 93% | 9.72 | 441 / 472 |
adipose | 100% | 1822.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3238.07 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.23 | 1 / 1 |
blood vessel | 100% | 1715.61 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1391.76 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1013.40 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1850.60 | 891 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 7.74 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 86% | 4.77 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 76% | 4.36 | 61 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF652 |
Protein name | Zinc finger protein 652 |
Synonyms | KIAA0924 hCG_27356 |
Description | FUNCTION: Functions as a transcriptional repressor. . |
Accessions | Q9Y2D9 D6RF85 ENST00000508237.5 ENST00000430262.3 ENST00000362063.6 |