Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 30% ± 7% | |
basal cell | 3 studies | 20% ± 7% |
Insufficient scRNA-seq data for expression of ENDOV at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1707.04 | 245 / 245 | 100% | 11.45 | 502 / 502 |
thymus | 100% | 1414.60 | 653 / 653 | 100% | 10.90 | 605 / 605 |
brain | 100% | 1353.13 | 2640 / 2642 | 100% | 12.72 | 704 / 705 |
pancreas | 100% | 621.40 | 327 / 328 | 100% | 7.11 | 178 / 178 |
kidney | 100% | 1409.33 | 89 / 89 | 99% | 9.27 | 895 / 901 |
breast | 100% | 1074.33 | 459 / 459 | 99% | 9.93 | 1107 / 1118 |
uterus | 100% | 1496.48 | 170 / 170 | 98% | 6.70 | 451 / 459 |
lung | 100% | 1001.86 | 578 / 578 | 97% | 7.02 | 1120 / 1155 |
ovary | 100% | 1295.21 | 180 / 180 | 97% | 6.10 | 415 / 430 |
skin | 100% | 1149.44 | 1809 / 1809 | 96% | 6.32 | 455 / 472 |
bladder | 100% | 1077.24 | 21 / 21 | 96% | 5.86 | 484 / 504 |
esophagus | 100% | 954.13 | 1445 / 1445 | 95% | 4.40 | 174 / 183 |
adrenal gland | 100% | 871.21 | 258 / 258 | 95% | 7.24 | 218 / 230 |
liver | 100% | 717.72 | 226 / 226 | 93% | 5.15 | 377 / 406 |
intestine | 100% | 1121.70 | 966 / 966 | 92% | 3.82 | 487 / 527 |
stomach | 100% | 820.16 | 359 / 359 | 87% | 3.30 | 248 / 286 |
adipose | 100% | 835.25 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 8.34 | 80 / 80 |
spleen | 100% | 1461.32 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.91 | 1 / 1 |
blood vessel | 100% | 838.91 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 771.24 | 801 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 5.10 | 44 / 45 |
heart | 97% | 436.31 | 835 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.51 | 28 / 29 |
peripheral blood | 55% | 228.31 | 515 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006281 | Biological process | DNA repair |
GO_0005730 | Cellular component | nucleolus |
GO_0010494 | Cellular component | cytoplasmic stress granule |
GO_0005737 | Cellular component | cytoplasm |
GO_0003677 | Molecular function | DNA binding |
GO_0016891 | Molecular function | RNA endonuclease activity, producing 5'-phosphomonoesters |
GO_0016888 | Molecular function | endodeoxyribonuclease activity, producing 5'-phosphomonoesters |
GO_0005515 | Molecular function | protein binding |
GO_0003727 | Molecular function | single-stranded RNA binding |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | ENDOV |
Protein name | Endonuclease V Endonuclease V (hEndoV) (EC 3.1.26.-) (Inosine-specific endoribonuclease) |
Synonyms | |
Description | FUNCTION: [Isoform 1]: Endoribonuclease that specifically cleaves inosine-containing RNAs: cleaves RNA at the second phosphodiester bond 3' to inosine . Active against both single-stranded and double-stranded RNAs . Has strong preference for single-stranded RNAs (ssRNAs) toward double-stranded RNAs (dsRNAs) . Cleaves mRNAs and tRNAs containing inosine . Also able to cleave structure-specific dsRNA substrates containing the specific sites 5'-IIUI-3' and 5'-UIUU-3' . Inosine is present in a number of RNAs following editing; the function of inosine-specific endoribonuclease is still unclear: it could either play a regulatory role in edited RNAs, or be involved in antiviral response by removing the hyperedited long viral dsRNA genome that has undergone A-to-I editing (Probable). Binds branched DNA structures . .; FUNCTION: [Isoform 6]: Endoribonuclease that specifically cleaves inosine-containing RNAs: cleaves RNA at the second phosphodiester bond 3' to inosine . Active against both single-stranded and double-stranded RNAs . Cleaves tRNAs containing inosine . .; FUNCTION: [Isoform 7]: Endoribonuclease that specifically cleaves inosine-containing RNAs: cleaves RNA at the second phosphodiester bond 3' to inosine . Active against both single-stranded and double-stranded RNAs . Cleaves tRNAs containing inosine . . |
Accessions | ENST00000522751.5 ENST00000517295.6 ENST00000520367.5 [Q8N8Q3-2] ENST00000523999.5 ENST00000519117.5 ENST00000518644.5 ENST00000520484.1 ENST00000523828.5 ENST00000520284.5 [Q8N8Q3-4] ENST00000523228.5 ENST00000572886.1 I3L0L4 ENST00000517795.5 [Q8N8Q3-5] ENST00000518901.5 [Q8N8Q3-5] E5RJ92 E5RHX4 H0YBZ5 A0A0G2JLD4 Q8N8Q3 E5RGZ9 I3L4M6 I3L1V3 ENST00000323854.9 [Q8N8Q3-3] I3L485 H0YAY5 ENST00000522200.5 E5RII5 ENST00000521634.5 ENST00000519331.1 ENST00000522577.5 ENST00000518907.5 [Q8N8Q3-4] I3L4V7 H0YBX8 ENST00000518137.6 [Q8N8Q3-1] E5RFW0 ENST00000521565.5 |