Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 24% ± 8% | |
microglial cell | 6 studies | 27% ± 8% | |
astrocyte | 6 studies | 28% ± 11% | |
macrophage | 6 studies | 30% ± 11% | |
glutamatergic neuron | 5 studies | 38% ± 18% | |
dendritic cell | 5 studies | 21% ± 5% | |
oligodendrocyte | 5 studies | 25% ± 8% | |
myeloid cell | 4 studies | 22% ± 8% | |
epithelial cell | 4 studies | 22% ± 4% | |
plasmacytoid dendritic cell | 4 studies | 25% ± 7% | |
B cell | 3 studies | 21% ± 2% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 17% ± 1% | |
natural killer cell | 3 studies | 20% ± 3% | |
GABAergic neuron | 3 studies | 44% ± 8% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 7% | |
monocyte | 3 studies | 21% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 35% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1010.81 | 21 / 21 | 100% | 6.33 | 504 / 504 |
esophagus | 100% | 827.86 | 1445 / 1445 | 100% | 5.34 | 183 / 183 |
ovary | 100% | 1265.75 | 180 / 180 | 100% | 6.23 | 430 / 430 |
prostate | 100% | 1005.89 | 245 / 245 | 100% | 5.18 | 502 / 502 |
stomach | 100% | 670.66 | 359 / 359 | 100% | 5.73 | 286 / 286 |
skin | 100% | 863.33 | 1808 / 1809 | 100% | 6.67 | 472 / 472 |
breast | 100% | 949.26 | 459 / 459 | 100% | 6.54 | 1117 / 1118 |
lung | 100% | 899.09 | 577 / 578 | 100% | 5.52 | 1155 / 1155 |
uterus | 100% | 1196.45 | 170 / 170 | 100% | 6.76 | 458 / 459 |
intestine | 100% | 924.62 | 966 / 966 | 100% | 5.99 | 525 / 527 |
pancreas | 100% | 551.39 | 328 / 328 | 99% | 5.34 | 177 / 178 |
thymus | 100% | 1037.99 | 653 / 653 | 99% | 5.77 | 601 / 605 |
brain | 99% | 692.43 | 2618 / 2642 | 100% | 6.13 | 705 / 705 |
liver | 100% | 810.16 | 226 / 226 | 99% | 4.42 | 402 / 406 |
kidney | 100% | 813.18 | 89 / 89 | 98% | 3.83 | 886 / 901 |
adrenal gland | 100% | 925.14 | 258 / 258 | 96% | 4.39 | 220 / 230 |
adipose | 100% | 892.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.87 | 29 / 29 |
spleen | 100% | 1487.60 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.91 | 1 / 1 |
blood vessel | 100% | 882.13 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 598.04 | 800 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1247.60 | 921 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 541.39 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 4.69 | 78 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_0042177 | Biological process | negative regulation of protein catabolic process |
GO_0034504 | Biological process | protein localization to nucleus |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | BANP |
Protein name | Protein BANP Protein BANP (BEN domain-containing protein 1) (Btg3-associated nuclear protein) (Scaffold/matrix-associated region-1-binding protein) BTG3 associated nuclear protein |
Synonyms | SMAR1 BEND1 |
Description | FUNCTION: Controls V(D)J recombination during T-cell development by repressing T-cell receptor (TCR) beta enhancer function. Binds to scaffold/matrix attachment region beta (S/MARbeta), an ATC-rich DNA sequence located upstream of the TCR beta enhancer. Represses cyclin D1 transcription by recruiting HDAC1 to its promoter, thereby diminishing H3K9ac, H3S10ph and H4K8ac levels. Promotes TP53 activation, which causes cell cycle arrest (By similarity). . |
Accessions | C9JLS0 C9JGM9 ENST00000436970.5 B4DE54 C9JLT2 ENST00000459966.5 ENST00000456902.5 C9JYB6 A0A0S2Z5G4 ENST00000355022.8 [Q8N9N5-2] ENST00000479780.6 [Q8N9N5-6] ENST00000700483.1 C9JTM8 E9PJI6 ENST00000393207.5 [Q8N9N5-1] A0A0S2Z696 A0A804HKG3 ENST00000626016.2 [Q8N9N5-5] C9JF73 Q8N9N5 ENST00000393208.6 [Q8N9N5-4] ENST00000466197.5 ENST00000454563.5 E9PIP2 ENST00000286122.11 [Q8N9N5-1] ENST00000423252.5 ENST00000439677.5 ENST00000436274.5 C9J811 A0A0S2Z5C2 ENST00000485772.5 ENST00000682872.1 ENST00000538234.5 [Q8N9N5-7] A0A0S2Z5M2 ENST00000412691.5 |