I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 20 studies | 56% ± 24% | |
| deuterosomal cell | 4 studies | 56% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| ciliated cell | 20 studies | 56% ± 24% | |
| deuterosomal cell | 4 studies | 56% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| lung | 97% | 1415.12 | 558 / 578 | 56% | 33.20 | 650 / 1155 |
| brain | 85% | 518.50 | 2255 / 2642 | 60% | 33.49 | 421 / 705 |
| kidney | 99% | 279.06 | 88 / 89 | 16% | 6.28 | 141 / 901 |
| thymus | 93% | 197.15 | 610 / 653 | 16% | 4.13 | 97 / 605 |
| ovary | 16% | 22.28 | 28 / 180 | 93% | 109.68 | 398 / 430 |
| ureter | 0% | 0 | 0 / 0 | 100% | 108.93 | 1 / 1 |
| pancreas | 52% | 34.84 | 170 / 328 | 39% | 14.97 | 70 / 178 |
| bladder | 38% | 110.38 | 8 / 21 | 42% | 21.73 | 211 / 504 |
| uterus | 24% | 373.86 | 41 / 170 | 48% | 56.40 | 220 / 459 |
| skin | 67% | 67.10 | 1213 / 1809 | 3% | 1.12 | 13 / 472 |
| intestine | 30% | 34.95 | 293 / 966 | 39% | 12.42 | 207 / 527 |
| prostate | 47% | 66.12 | 115 / 245 | 23% | 7.66 | 113 / 502 |
| stomach | 23% | 17.66 | 84 / 359 | 36% | 8.92 | 103 / 286 |
| esophagus | 18% | 11.73 | 253 / 1445 | 27% | 9.55 | 50 / 183 |
| muscle | 27% | 25.07 | 213 / 803 | 0% | 0 | 0 / 0 |
| breast | 3% | 1.37 | 12 / 459 | 21% | 8.94 | 237 / 1118 |
| tonsil | 0% | 0 | 0 / 0 | 20% | 3.73 | 9 / 45 |
| liver | 3% | 2.00 | 7 / 226 | 14% | 6.10 | 55 / 406 |
| peripheral blood | 8% | 18.65 | 71 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.49 | 1 / 29 |
| adipose | 1% | 0.83 | 16 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 1% | 2.47 | 3 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 1% | 0.47 | 8 / 1335 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 0.14 | 1 / 258 | 0% | 0 | 0 / 230 |
| heart | 0% | 0.12 | 2 / 861 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0060271 | Biological process | cilium assembly |
| GO_0002508 | Biological process | central tolerance induction |
| GO_0007283 | Biological process | spermatogenesis |
| GO_0007507 | Biological process | heart development |
| GO_0032715 | Biological process | negative regulation of interleukin-6 production |
| GO_0007368 | Biological process | determination of left/right symmetry |
| GO_0090630 | Biological process | activation of GTPase activity |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0044458 | Biological process | motile cilium assembly |
| GO_0072016 | Biological process | glomerular parietal epithelial cell development |
| GO_0002897 | Biological process | positive regulation of central B cell tolerance induction |
| GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
| GO_0002635 | Biological process | negative regulation of germinal center formation |
| GO_0033085 | Biological process | negative regulation of T cell differentiation in thymus |
| GO_0032053 | Biological process | ciliary basal body organization |
| GO_0032088 | Biological process | negative regulation of NF-kappaB transcription factor activity |
| GO_0006959 | Biological process | humoral immune response |
| GO_0035089 | Biological process | establishment of apical/basal cell polarity |
| GO_0030036 | Biological process | actin cytoskeleton organization |
| GO_1901248 | Biological process | positive regulation of lung ciliated cell differentiation |
| GO_0002924 | Biological process | negative regulation of humoral immune response mediated by circulating immunoglobulin |
| GO_0050900 | Biological process | leukocyte migration |
| GO_0007389 | Biological process | pattern specification process |
| GO_0042130 | Biological process | negative regulation of T cell proliferation |
| GO_0035082 | Biological process | axoneme assembly |
| GO_0007420 | Biological process | brain development |
| GO_0060428 | Biological process | lung epithelium development |
| GO_0008104 | Biological process | protein localization |
| GO_0060429 | Biological process | epithelium development |
| GO_0048469 | Biological process | cell maturation |
| GO_0050869 | Biological process | negative regulation of B cell activation |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0035502 | Biological process | metanephric part of ureteric bud development |
| GO_0000785 | Cellular component | chromatin |
| GO_0005634 | Cellular component | nucleus |
| GO_0003677 | Molecular function | DNA binding |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0000976 | Molecular function | transcription cis-regulatory region binding |
| GO_0003700 | Molecular function | DNA-binding transcription factor activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | FOXJ1 |
| Protein name | Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4) |
| Synonyms | FKHL13 HFH4 |
| Description | FUNCTION: Transcription factor specifically required for the formation of motile cilia . Acts by activating transcription of genes that mediate assembly of motile cilia, such as CFAP157. Binds the DNA consensus sequences 5'-HWDTGTTTGTTTA-3' or 5'-KTTTGTTGTTKTW-3' (where H is not G, W is A or T, D is not C, and K is G or T). Activates the transcription of a variety of ciliary proteins in the developing brain and lung. . |
| Accessions | ENST00000322957.7 Q92949 |
