Insufficient scRNA-seq data for expression of PRDM13 at single-cell level.
Insufficient scRNA-seq data for expression of PRDM13 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 4% | 0.19 | 69 / 1809 | 42% | 1.59 | 196 / 472 |
uterus | 3% | 0.12 | 5 / 170 | 24% | 0.81 | 109 / 459 |
tonsil | 0% | 0 | 0 / 0 | 27% | 0.97 | 12 / 45 |
brain | 15% | 5.03 | 396 / 2642 | 8% | 0.35 | 56 / 705 |
esophagus | 7% | 0.32 | 99 / 1445 | 15% | 0.33 | 27 / 183 |
peripheral blood | 21% | 6.55 | 199 / 929 | 0% | 0 | 0 / 0 |
pancreas | 20% | 1.18 | 67 / 328 | 1% | 0.02 | 1 / 178 |
lung | 3% | 0.10 | 16 / 578 | 17% | 0.55 | 202 / 1155 |
bladder | 10% | 0.48 | 2 / 21 | 8% | 0.28 | 42 / 504 |
intestine | 6% | 0.30 | 58 / 966 | 10% | 0.26 | 54 / 527 |
stomach | 2% | 0.08 | 8 / 359 | 11% | 0.32 | 31 / 286 |
spleen | 10% | 0.67 | 24 / 241 | 0% | 0 | 0 / 0 |
breast | 4% | 0.18 | 19 / 459 | 5% | 0.16 | 54 / 1118 |
ovary | 4% | 0.17 | 8 / 180 | 1% | 0.02 | 4 / 430 |
eye | 0% | 0 | 0 / 0 | 4% | 0.12 | 3 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
adipose | 3% | 0.13 | 39 / 1204 | 0% | 0 | 0 / 0 |
thymus | 3% | 0.10 | 18 / 653 | 0% | 0.00 | 1 / 605 |
liver | 1% | 0.04 | 2 / 226 | 1% | 0.03 | 4 / 406 |
muscle | 1% | 0.06 | 12 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 0.05 | 18 / 1335 | 0% | 0 | 0 / 0 |
kidney | 1% | 0.04 | 1 / 89 | 0% | 0.01 | 2 / 901 |
adrenal gland | 0% | 0.01 | 1 / 258 | 1% | 0.02 | 2 / 230 |
prostate | 1% | 0.04 | 2 / 245 | 0% | 0 | 0 / 502 |
heart | 1% | 0.03 | 6 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0021979 | Biological process | hypothalamus cell differentiation |
GO_0097154 | Biological process | GABAergic neuron differentiation |
GO_0032259 | Biological process | methylation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006338 | Biological process | chromatin remodeling |
GO_0005634 | Cellular component | nucleus |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0003677 | Molecular function | DNA binding |
GO_0042054 | Molecular function | histone methyltransferase activity |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0003682 | Molecular function | chromatin binding |
Gene name | PRDM13 |
Protein name | PR domain zinc finger protein 13 (EC 2.1.1.-) (PR domain-containing protein 13) PR/SET domain 13 |
Synonyms | PFM10 |
Description | FUNCTION: May be involved in transcriptional regulation. Is required for the differentiation of KISS1-expressing neurons in the arcuate (Arc) nucleus of the hypothalamus. Is a critical regulator of GABAergic cell fate in the cerebellum, required for normal postnatal cerebellar development (By similarity). . |
Accessions | A0A0A0MRL5 Q9H4Q3 ENST00000369215.5 ENST00000369214.2 |