Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 8193.38 | 459 / 459 | 100% | 141.24 | 1117 / 1118 |
brain | 100% | 9019.34 | 2639 / 2642 | 100% | 143.17 | 705 / 705 |
prostate | 100% | 8248.26 | 245 / 245 | 100% | 114.66 | 501 / 502 |
thymus | 100% | 8903.08 | 653 / 653 | 99% | 121.16 | 600 / 605 |
uterus | 100% | 10217.99 | 170 / 170 | 99% | 94.42 | 455 / 459 |
ovary | 100% | 9615.77 | 180 / 180 | 99% | 62.95 | 426 / 430 |
bladder | 100% | 10351.19 | 21 / 21 | 99% | 125.47 | 499 / 504 |
esophagus | 100% | 8274.41 | 1445 / 1445 | 99% | 76.51 | 181 / 183 |
pancreas | 99% | 4029.76 | 326 / 328 | 99% | 73.43 | 177 / 178 |
lung | 100% | 7542.49 | 578 / 578 | 99% | 71.26 | 1139 / 1155 |
intestine | 100% | 9149.49 | 966 / 966 | 97% | 68.92 | 510 / 527 |
stomach | 100% | 6598.70 | 359 / 359 | 97% | 69.33 | 276 / 286 |
skin | 100% | 8983.16 | 1809 / 1809 | 93% | 89.82 | 441 / 472 |
kidney | 100% | 5811.29 | 89 / 89 | 93% | 52.43 | 836 / 901 |
adrenal gland | 100% | 6643.88 | 258 / 258 | 92% | 50.96 | 212 / 230 |
liver | 99% | 3058.02 | 224 / 226 | 84% | 34.75 | 340 / 406 |
blood vessel | 100% | 8708.01 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 87.91 | 29 / 29 |
muscle | 100% | 6466.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 8175.97 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 77.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 62.24 | 1 / 1 |
adipose | 100% | 7247.87 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 5741.87 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 5497.10 | 860 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 66% | 29.42 | 53 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030900 | Biological process | forebrain development |
GO_0001764 | Biological process | neuron migration |
GO_0071318 | Biological process | cellular response to ATP |
GO_0007409 | Biological process | axonogenesis |
GO_0070301 | Biological process | cellular response to hydrogen peroxide |
GO_0006265 | Biological process | DNA topological change |
GO_0000712 | Biological process | resolution of meiotic recombination intermediates |
GO_0090398 | Biological process | cellular senescence |
GO_0000819 | Biological process | sister chromatid segregation |
GO_0030183 | Biological process | B cell differentiation |
GO_2001034 | Biological process | positive regulation of double-strand break repair via nonhomologous end joining |
GO_0045870 | Biological process | positive regulation of single stranded viral RNA replication via double stranded DNA intermediate |
GO_0005730 | Cellular component | nucleolus |
GO_0000792 | Cellular component | heterochromatin |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0003918 | Molecular function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
GO_0043021 | Molecular function | ribonucleoprotein complex binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TOP2B |
Protein name | DNA topoisomerase II beta DNA topoisomerase 2-beta (EC 5.6.2.2) (DNA topoisomerase II, beta isozyme) DNA topoisomerase 2 (EC 5.6.2.2) Alternative protein TOP2B |
Synonyms | |
Description | FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. Plays a role in B-cell differentiation. . FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. . FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. . FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. . FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. . FUNCTION: Key decatenating enzyme that alters DNA topology by binding to two double-stranded DNA molecules, generating a double-stranded break in one of the strands, passing the intact strand through the broken strand, and religating the broken strand. . |
Accessions | L8E8K5 A0A8V8TPE3 Q71UH4 ENST00000413971.5 ENST00000699043.1 ENST00000264331.9 [Q02880-1] E9PCY5 ENST00000699038.1 H7BZ82 A0A8V8TN33 ENST00000699037.1 ENST00000424225.1 ENST00000435706.6 [Q02880-2] Q02880 A0A8V8TP20 |