Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 7 studies | 37% ± 14% | |
lung | 6 studies | 21% ± 7% | |
peripheral blood | 5 studies | 21% ± 3% | |
pancreas | 4 studies | 23% ± 5% | |
intestine | 3 studies | 25% ± 11% | |
kidney | 3 studies | 20% ± 4% | |
uterus | 3 studies | 22% ± 6% | |
brain | 3 studies | 25% ± 2% | |
lymph node | 3 studies | 23% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1993.53 | 258 / 258 | 100% | 91.20 | 230 / 230 |
thymus | 100% | 3534.52 | 653 / 653 | 100% | 96.88 | 604 / 605 |
uterus | 100% | 1295.38 | 170 / 170 | 100% | 46.03 | 458 / 459 |
kidney | 100% | 3107.01 | 89 / 89 | 100% | 52.47 | 897 / 901 |
liver | 100% | 1519.68 | 226 / 226 | 100% | 45.13 | 404 / 406 |
brain | 100% | 1547.87 | 2631 / 2642 | 100% | 68.63 | 704 / 705 |
prostate | 100% | 1485.27 | 245 / 245 | 99% | 31.47 | 498 / 502 |
ovary | 100% | 1680.89 | 180 / 180 | 98% | 32.15 | 423 / 430 |
skin | 99% | 1624.37 | 1786 / 1809 | 99% | 49.86 | 467 / 472 |
breast | 100% | 2258.41 | 458 / 459 | 97% | 27.19 | 1084 / 1118 |
intestine | 100% | 1330.65 | 965 / 966 | 97% | 30.11 | 510 / 527 |
lung | 99% | 1825.54 | 575 / 578 | 97% | 38.46 | 1121 / 1155 |
bladder | 100% | 2061.29 | 21 / 21 | 96% | 35.59 | 482 / 504 |
esophagus | 98% | 1165.79 | 1415 / 1445 | 96% | 26.11 | 175 / 183 |
stomach | 100% | 1132.29 | 358 / 359 | 94% | 25.08 | 268 / 286 |
pancreas | 92% | 654.78 | 303 / 328 | 99% | 42.97 | 177 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.42 | 29 / 29 |
spleen | 100% | 1202.38 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.70 | 1 / 1 |
blood vessel | 100% | 1843.74 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1930.12 | 1200 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1791.40 | 901 / 929 | 0% | 0 | 0 / 0 |
heart | 96% | 1401.48 | 830 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 28.85 | 76 / 80 |
tonsil | 0% | 0 | 0 / 0 | 93% | 27.07 | 42 / 45 |
muscle | 89% | 820.13 | 714 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045454 | Biological process | cell redox homeostasis |
GO_0007605 | Biological process | sensory perception of sound |
GO_0070059 | Biological process | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress |
GO_0006986 | Biological process | response to unfolded protein |
GO_0009948 | Biological process | anterior/posterior axis specification |
GO_0001955 | Biological process | blood vessel maturation |
GO_0051091 | Biological process | positive regulation of DNA-binding transcription factor activity |
GO_0034976 | Biological process | response to endoplasmic reticulum stress |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0045662 | Biological process | negative regulation of myoblast differentiation |
GO_0006974 | Biological process | DNA damage response |
GO_0036500 | Biological process | ATF6-mediated unfolded protein response |
GO_0045599 | Biological process | negative regulation of fat cell differentiation |
GO_2001244 | Biological process | positive regulation of intrinsic apoptotic signaling pathway |
GO_0006983 | Biological process | ER overload response |
GO_0051209 | Biological process | release of sequestered calcium ion into cytosol |
GO_0036499 | Biological process | PERK-mediated unfolded protein response |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0140467 | Biological process | integrated stress response signaling |
GO_0043433 | Biological process | negative regulation of DNA-binding transcription factor activity |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_1990442 | Biological process | intrinsic apoptotic signaling pathway in response to nitrosative stress |
GO_0043525 | Biological process | positive regulation of neuron apoptotic process |
GO_0042594 | Biological process | response to starvation |
GO_0051898 | Biological process | negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0120163 | Biological process | negative regulation of cold-induced thermogenesis |
GO_0030968 | Biological process | endoplasmic reticulum unfolded protein response |
GO_1990874 | Biological process | vascular associated smooth muscle cell proliferation |
GO_0010506 | Biological process | regulation of autophagy |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_1904738 | Biological process | vascular associated smooth muscle cell migration |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0072655 | Biological process | establishment of protein localization to mitochondrion |
GO_0032757 | Biological process | positive regulation of interleukin-8 production |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0032713 | Biological process | negative regulation of interleukin-4 production |
GO_2000016 | Biological process | negative regulation of determination of dorsal identity |
GO_0036119 | Biological process | response to platelet-derived growth factor |
GO_0032689 | Biological process | negative regulation of type II interferon production |
GO_0060840 | Biological process | artery development |
GO_0010467 | Biological process | gene expression |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0032700 | Biological process | negative regulation of interleukin-17 production |
GO_0009611 | Biological process | response to wounding |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0032993 | Cellular component | protein-DNA complex |
GO_1990617 | Cellular component | CHOP-ATF4 complex |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0005829 | Cellular component | cytosol |
GO_1990622 | Cellular component | CHOP-ATF3 complex |
GO_0005770 | Cellular component | late endosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0036488 | Cellular component | CHOP-C/EBP complex |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0008134 | Molecular function | transcription factor binding |
GO_0003677 | Molecular function | DNA binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
GO_0043522 | Molecular function | leucine zipper domain binding |
GO_0140416 | Molecular function | transcription regulator inhibitor activity |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0140537 | Molecular function | transcription regulator activator activity |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0008140 | Molecular function | cAMP response element binding protein binding |
Gene name | DDIT3 |
Protein name | DNA damage inducible transcript 3 DNA damage-inducible transcript 3 protein (DDIT-3) (C/EBP zeta) (C/EBP-homologous protein) (C/EBP-homologous protein 10) (CCAAT/enhancer-binding protein homologous protein) (Growth arrest and DNA-damage-inducible protein GADD153) DNA damage-inducible transcript 3 protein (DDIT-3) (C/EBP zeta) (C/EBP-homologous protein) (CHOP) (C/EBP-homologous protein 10) (CHOP-10) (CCAAT/enhancer-binding protein homologous protein) (Growth arrest and DNA damage-inducible protein GADD153) DDIT3 upstream open reading frame protein (Alternative DDIT3 protein) (AltDDIT3) |
Synonyms | GADD153 CHOP hCG_39661 CHOP10 |
Description | FUNCTION: Multifunctional transcription factor in endoplasmic reticulum (ER) stress response . Plays an essential role in the response to a wide variety of cell stresses and induces cell cycle arrest and apoptosis in response to ER stress . Plays a dual role both as an inhibitor of CCAAT/enhancer-binding protein (C/EBP) function and as an activator of other genes (By similarity). Acts as a dominant-negative regulator of C/EBP-induced transcription: dimerizes with members of the C/EBP family, impairs their association with C/EBP binding sites in the promoter regions, and inhibits the expression of C/EBP regulated genes (By similarity). Positively regulates the transcription of TRIB3, IL6, IL8, IL23, TNFRSF10B/DR5, PPP1R15A/GADD34, BBC3/PUMA, BCL2L11/BIM and ERO1L . Negatively regulates; expression of BCL2 and MYOD1, ATF4-dependent transcriptional activation of asparagine synthetase (ASNS), CEBPA-dependent transcriptional activation of hepcidin (HAMP) and CEBPB-mediated expression of peroxisome proliferator-activated receptor gamma (PPARG) . Together with ATF4, mediates ER-mediated cell death by promoting expression of genes involved in cellular amino acid metabolic processes, mRNA translation and the unfolded protein response (UPR) in response to ER stress (By similarity). Inhibits the canonical Wnt signaling pathway by binding to TCF7L2/TCF4, impairing its DNA-binding properties and repressing its transcriptional activity . Plays a regulatory role in the inflammatory response through the induction of caspase-11 (CASP4/CASP11) which induces the activation of caspase-1 (CASP1) and both these caspases increase the activation of pro-IL1B to mature IL1B which is involved in the inflammatory response (By similarity). Acts as a major regulator of postnatal neovascularization through regulation of endothelial nitric oxide synthase (NOS3)-related signaling (By similarity). . FUNCTION: Multifunctional transcription factor in ER stress response. Plays an essential role in the response to a wide variety of cell stresses and induces cell cycle arrest and apoptosis in response to ER stress. Plays a dual role both as an inhibitor of CCAAT/enhancer-binding protein (C/EBP) function and as an activator of other genes. Acts as a dominant-negative regulator of C/EBP-induced transcription: dimerizes with members of the C/EBP family, impairs their association with C/EBP binding sites in the promoter regions, and inhibits the expression of C/EBP regulated genes. Positively regulates the transcription of TRIB3, IL6, IL8, IL23, TNFRSF10B/DR5, PPP1R15A/GADD34, BBC3/PUMA, BCL2L11/BIM and ERO1L. Negatively regulates; expression of BCL2 and MYOD1, ATF4-dependent transcriptional activation of asparagine synthetase (ASNS), CEBPA-dependent transcriptional activation of hepcidin (HAMP) and CEBPB-mediated expression of peroxisome proliferator-activated receptor gamma (PPARG). Inhibits the canonical Wnt signaling pathway by binding to TCF7L2/TCF4, impairing its DNA-binding properties and repressing its transcriptional activity. Plays a regulatory role in the inflammatory response through the induction of caspase-11 (CASP4/CASP11) which induces the activation of caspase-1 (CASP1) and both these caspases increase the activation of pro-IL1B to mature IL1B which is involved in the inflammatory response. . FUNCTION: [Isoform AltDDIT3]: Product of the upstream open reading frame (uORF) of DDIT3/CHOP that is specifically produced in absence of stress, thereby preventing translation of downstream stress effector DDIT3/CHOP. . |
Accessions | ENST00000552740.5 [P35638-2] ENST00000346473.8 [P35638-1] F8W133 Q53YD1 ENST00000547303.5 [P35638-1] ENST00000551116.5 [P35638-2] ENST00000623876.2 [P35638-1] P35638 P0DPQ6 ENST00000547526.1 |