I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 7 studies | 25% ± 10% | |
| epithelial cell | 3 studies | 33% ± 7% | |
| abnormal cell | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| ciliated cell | 7 studies | 25% ± 10% | |
| epithelial cell | 3 studies | 33% ± 7% | |
| abnormal cell | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| bladder | 100% | 1862.38 | 21 / 21 | 100% | 23.25 | 504 / 504 |
| breast | 100% | 1984.47 | 459 / 459 | 100% | 29.66 | 1118 / 1118 |
| esophagus | 100% | 1597.75 | 1445 / 1445 | 100% | 22.37 | 183 / 183 |
| intestine | 100% | 2069.23 | 966 / 966 | 100% | 27.05 | 527 / 527 |
| liver | 100% | 1313.60 | 226 / 226 | 100% | 14.30 | 406 / 406 |
| ovary | 100% | 2301.29 | 180 / 180 | 100% | 26.48 | 430 / 430 |
| pancreas | 100% | 1177.68 | 328 / 328 | 100% | 18.43 | 178 / 178 |
| prostate | 100% | 1962.63 | 245 / 245 | 100% | 26.52 | 502 / 502 |
| stomach | 100% | 1437.04 | 359 / 359 | 100% | 24.14 | 286 / 286 |
| uterus | 100% | 2273.91 | 170 / 170 | 100% | 20.34 | 459 / 459 |
| thymus | 100% | 2187.15 | 653 / 653 | 100% | 20.46 | 604 / 605 |
| lung | 100% | 1455.71 | 577 / 578 | 100% | 22.93 | 1155 / 1155 |
| brain | 100% | 1065.73 | 2637 / 2642 | 100% | 29.56 | 705 / 705 |
| kidney | 100% | 1499.55 | 89 / 89 | 100% | 18.06 | 898 / 901 |
| skin | 100% | 1708.13 | 1809 / 1809 | 99% | 22.52 | 467 / 472 |
| adrenal gland | 100% | 1323.44 | 258 / 258 | 99% | 12.56 | 227 / 230 |
| adipose | 100% | 1654.87 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1455.39 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 11.40 | 29 / 29 |
| muscle | 100% | 1187.07 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1820.40 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 16.21 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 12.57 | 1 / 1 |
| heart | 99% | 907.17 | 854 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 98% | 13.00 | 78 / 80 |
| peripheral blood | 91% | 902.37 | 848 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0030154 | Biological process | cell differentiation |
| GO_0045321 | Biological process | leukocyte activation |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0003677 | Molecular function | DNA binding |
| GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0008270 | Molecular function | zinc ion binding |
| Gene name | ZNF3 |
| Protein name | Zinc finger protein 3 (A8-51) Zinc finger protein 3 Zinc finger protein 3 (Zinc finger protein HF.12) (Zinc finger protein HZF3.1) (Zinc finger protein KOX25) |
| Synonyms | KOX25 tcag7.618 |
| Description | FUNCTION: Involved in cell differentiation and/or proliferation. |
| Accessions | ENST00000441298.5 C9JK31 C9JE35 ENST00000424697.5 [P17036-1] ENST00000428683.5 ENST00000413658.6 [P17036-2] F8WA60 ENST00000299667.9 [P17036-1] Q86U76 ENST00000292393.9 ENST00000449785.5 ENST00000412947.6 P17036 ENST00000415068.1 C9J5S8 A4D2A4 |
