Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 26% ± 8% | |
ciliated cell | 5 studies | 24% ± 5% | |
endothelial cell | 3 studies | 18% ± 2% | |
basal cell | 3 studies | 21% ± 4% | |
GABAergic neuron | 3 studies | 24% ± 6% | |
glutamatergic neuron | 3 studies | 31% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 849.43 | 21 / 21 | 100% | 19.10 | 504 / 504 |
esophagus | 100% | 854.49 | 1445 / 1445 | 100% | 17.60 | 183 / 183 |
ovary | 100% | 892.98 | 180 / 180 | 100% | 18.85 | 430 / 430 |
prostate | 100% | 1073.28 | 245 / 245 | 100% | 13.92 | 502 / 502 |
stomach | 100% | 753.30 | 359 / 359 | 100% | 17.88 | 286 / 286 |
thymus | 100% | 1263.96 | 653 / 653 | 100% | 13.95 | 605 / 605 |
uterus | 100% | 917.36 | 170 / 170 | 100% | 17.57 | 459 / 459 |
intestine | 100% | 787.83 | 966 / 966 | 100% | 19.93 | 526 / 527 |
skin | 100% | 1127.82 | 1809 / 1809 | 100% | 18.45 | 471 / 472 |
breast | 100% | 883.21 | 459 / 459 | 100% | 14.58 | 1114 / 1118 |
lung | 99% | 735.44 | 573 / 578 | 100% | 15.32 | 1155 / 1155 |
adrenal gland | 100% | 1156.24 | 258 / 258 | 99% | 9.51 | 228 / 230 |
pancreas | 99% | 567.26 | 326 / 328 | 99% | 11.46 | 177 / 178 |
brain | 99% | 554.93 | 2610 / 2642 | 100% | 11.42 | 705 / 705 |
liver | 100% | 617.59 | 226 / 226 | 98% | 8.80 | 399 / 406 |
kidney | 100% | 799.53 | 89 / 89 | 95% | 9.10 | 855 / 901 |
eye | 0% | 0 | 0 / 0 | 100% | 16.32 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.12 | 29 / 29 |
spleen | 100% | 987.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.12 | 1 / 1 |
adipose | 100% | 820.76 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 514.11 | 1323 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 456.03 | 789 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 455.78 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 68% | 498.85 | 635 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006360 | Biological process | transcription by RNA polymerase I |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0005736 | Cellular component | RNA polymerase I complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005666 | Cellular component | RNA polymerase III complex |
GO_0001650 | Cellular component | fibrillar center |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0001056 | Molecular function | RNA polymerase III activity |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0001054 | Molecular function | RNA polymerase I activity |
GO_0005515 | Molecular function | protein binding |
GO_0003899 | Molecular function | DNA-directed 5'-3' RNA polymerase activity |
Gene name | POLR1C |
Protein name | DNA-directed RNA polymerases I and III subunit RPAC1 RNA polymerase I and III subunit C Alternative protein POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40) |
Synonyms | POLR1E |
Description | FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I and III which synthesize ribosomal RNA precursors and short non-coding RNAs including 5S rRNA, snRNAs, tRNAs and miRNAs, respectively. POLR1C/RPAC1 is part of the polymerase core and may function as a clamp element that moves to open and close the cleft. . |
Accessions | H0Y723 ENST00000372344.6 Q96HT3 ENST00000643799.1 A0A2R8YEY5 E7EQB9 ENST00000607635.2 [O15160-2] ENST00000423780.1 D6RDJ3 ENST00000428025.6 ENST00000646700.1 ENST00000645141.1 ENST00000642195.1 [O15160-1] ENST00000646433.1 L8ECB7 A0A2R8YEZ4 ENST00000643341.1 A0A2R8Y5D3 ENST00000646188.1 O15160 A0A2R8Y8D6 ENST00000304004.7 [O15160-2] |