Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 27% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3476.91 | 1445 / 1445 | 100% | 55.17 | 183 / 183 |
ovary | 100% | 5353.15 | 180 / 180 | 100% | 54.30 | 430 / 430 |
pancreas | 100% | 2181.16 | 328 / 328 | 100% | 48.57 | 178 / 178 |
uterus | 100% | 4614.75 | 170 / 170 | 100% | 95.78 | 459 / 459 |
brain | 100% | 3231.89 | 2639 / 2642 | 100% | 70.61 | 705 / 705 |
skin | 100% | 3947.51 | 1809 / 1809 | 100% | 60.14 | 471 / 472 |
liver | 100% | 1955.08 | 226 / 226 | 100% | 36.79 | 405 / 406 |
intestine | 100% | 3434.41 | 966 / 966 | 100% | 63.39 | 525 / 527 |
lung | 100% | 3009.58 | 577 / 578 | 100% | 57.83 | 1151 / 1155 |
prostate | 100% | 4503.61 | 245 / 245 | 99% | 56.63 | 499 / 502 |
thymus | 100% | 3842.29 | 653 / 653 | 99% | 56.38 | 601 / 605 |
kidney | 100% | 2925.83 | 89 / 89 | 99% | 39.31 | 895 / 901 |
stomach | 100% | 2597.88 | 359 / 359 | 99% | 56.58 | 284 / 286 |
breast | 100% | 3701.96 | 459 / 459 | 99% | 59.46 | 1110 / 1118 |
bladder | 100% | 3478.52 | 21 / 21 | 99% | 77.26 | 499 / 504 |
adrenal gland | 100% | 3797.60 | 258 / 258 | 99% | 44.92 | 227 / 230 |
adipose | 100% | 3046.49 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 66.41 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 76.12 | 29 / 29 |
muscle | 100% | 3236.71 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3879.64 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 98.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 46.73 | 1 / 1 |
blood vessel | 100% | 2718.96 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2366.42 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 2495.23 | 913 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006384 | Biological process | transcription initiation at RNA polymerase III promoter |
GO_0035914 | Biological process | skeletal muscle cell differentiation |
GO_0042797 | Biological process | tRNA transcription by RNA polymerase III |
GO_0042791 | Biological process | 5S class rRNA transcription by RNA polymerase III |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0000127 | Cellular component | transcription factor TFIIIC complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0001002 | Molecular function | RNA polymerase III type 1 promoter sequence-specific DNA binding |
GO_0003677 | Molecular function | DNA binding |
GO_0000995 | Molecular function | RNA polymerase III general transcription initiation factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0001003 | Molecular function | RNA polymerase III type 2 promoter sequence-specific DNA binding |
Gene name | GTF3C5 |
Protein name | General transcription factor IIIC subunit 5 General transcription factor IIIC subunit 5 (General transcription factor IIIC, polypeptide 5, 63kDa, isoform CRA_c) General transcription factor 3C polypeptide 5 (TF3C-epsilon) (Transcription factor IIIC 63 kDa subunit) (TFIIIC 63 kDa subunit) (TFIIIC63) (Transcription factor IIIC subunit epsilon) |
Synonyms | hCG_31454 CDABP0017 |
Description | FUNCTION: Involved in RNA polymerase III-mediated transcription. Integral, tightly associated component of the DNA-binding TFIIIC2 subcomplex that directly binds tRNA and virus-associated RNA promoters. |
Accessions | H0Y5D2 ENST00000440319.5 Q5T7U4 Q5T7U1 H7BY84 Q9Y5Q8 ENST00000372097.10 [Q9Y5Q8-1] Q5T7U0 ENST00000439697.1 ENST00000372099.10 ENST00000435745.1 ENST00000342018.12 ENST00000372108.9 [Q9Y5Q8-3] |