Insufficient scRNA-seq data for expression of HESX1 at single-cell level.
Insufficient scRNA-seq data for expression of HESX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 47.56 | 2612 / 2642 | 98% | 3.62 | 693 / 705 |
prostate | 100% | 55.50 | 244 / 245 | 95% | 2.29 | 478 / 502 |
breast | 99% | 60.52 | 455 / 459 | 93% | 2.73 | 1045 / 1118 |
ovary | 100% | 55.68 | 180 / 180 | 88% | 2.52 | 380 / 430 |
thymus | 100% | 66.75 | 650 / 653 | 85% | 1.79 | 516 / 605 |
kidney | 100% | 62.04 | 89 / 89 | 80% | 1.84 | 719 / 901 |
pancreas | 97% | 39.59 | 318 / 328 | 82% | 1.54 | 146 / 178 |
uterus | 98% | 42.59 | 166 / 170 | 81% | 2.33 | 372 / 459 |
skin | 99% | 59.92 | 1795 / 1809 | 77% | 2.39 | 364 / 472 |
lung | 97% | 43.94 | 562 / 578 | 73% | 1.57 | 840 / 1155 |
adrenal gland | 100% | 67.23 | 257 / 258 | 65% | 1.53 | 149 / 230 |
bladder | 100% | 34.05 | 21 / 21 | 63% | 1.46 | 315 / 504 |
liver | 97% | 52.38 | 219 / 226 | 55% | 1.09 | 225 / 406 |
stomach | 98% | 46.44 | 352 / 359 | 48% | 0.93 | 137 / 286 |
esophagus | 96% | 32.75 | 1387 / 1445 | 49% | 0.99 | 90 / 183 |
intestine | 98% | 36.81 | 946 / 966 | 45% | 0.75 | 235 / 527 |
spleen | 100% | 67.46 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.35 | 1 / 1 |
adipose | 98% | 46.42 | 1183 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 3.24 | 28 / 29 |
blood vessel | 96% | 34.95 | 1281 / 1335 | 0% | 0 | 0 / 0 |
heart | 85% | 21.89 | 736 / 861 | 0% | 0 | 0 / 0 |
muscle | 75% | 18.23 | 601 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 67% | 1.49 | 30 / 45 |
peripheral blood | 30% | 33.20 | 276 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 0.40 | 18 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008406 | Biological process | gonad development |
GO_0045995 | Biological process | regulation of embryonic development |
GO_0030916 | Biological process | otic vesicle formation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0071276 | Biological process | cellular response to cadmium ion |
GO_0035264 | Biological process | multicellular organism growth |
GO_0030878 | Biological process | thyroid gland development |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0060070 | Biological process | canonical Wnt signaling pathway |
GO_0043584 | Biological process | nose development |
GO_0070371 | Biological process | ERK1 and ERK2 cascade |
GO_0019827 | Biological process | stem cell population maintenance |
GO_0007420 | Biological process | brain development |
GO_0043010 | Biological process | camera-type eye development |
GO_0010467 | Biological process | gene expression |
GO_0021983 | Biological process | pituitary gland development |
GO_0048863 | Biological process | stem cell differentiation |
GO_0048861 | Biological process | leukemia inhibitory factor signaling pathway |
GO_0048853 | Biological process | forebrain morphogenesis |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003682 | Molecular function | chromatin binding |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | HESX1 |
Protein name | Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf) Homeobox expressed in ES cells 1 HESX homeobox 1 |
Synonyms | HANF |
Description | FUNCTION: Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation. . |
Accessions | J3KR67 C9J0A9 Q9UBX0 ENST00000295934.8 ENST00000647958.1 ENST00000473921.2 ENST00000495160.2 |