Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 15 studies | 35% ± 19% | |
oligodendrocyte | 10 studies | 28% ± 9% | |
oligodendrocyte precursor cell | 8 studies | 33% ± 13% | |
endothelial cell | 7 studies | 25% ± 9% | |
microglial cell | 6 studies | 23% ± 6% | |
GABAergic neuron | 4 studies | 38% ± 8% | |
macrophage | 4 studies | 20% ± 4% | |
ciliated cell | 3 studies | 26% ± 3% | |
retinal rod cell | 3 studies | 15% ± 0% | |
glutamatergic neuron | 3 studies | 50% ± 5% | |
ependymal cell | 3 studies | 42% ± 13% | |
adipocyte | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 11237.24 | 653 / 653 | 98% | 20.45 | 590 / 605 |
brain | 99% | 2682.91 | 2603 / 2642 | 98% | 23.93 | 691 / 705 |
adrenal gland | 100% | 2977.09 | 257 / 258 | 92% | 10.35 | 212 / 230 |
prostate | 100% | 3797.30 | 244 / 245 | 92% | 9.21 | 460 / 502 |
kidney | 99% | 3609.47 | 88 / 89 | 89% | 13.03 | 805 / 901 |
breast | 99% | 3514.62 | 453 / 459 | 84% | 9.93 | 944 / 1118 |
pancreas | 99% | 2129.07 | 325 / 328 | 67% | 5.20 | 119 / 178 |
uterus | 99% | 3348.49 | 168 / 170 | 47% | 3.87 | 218 / 459 |
lung | 97% | 2225.27 | 558 / 578 | 40% | 3.24 | 461 / 1155 |
ovary | 100% | 5530.55 | 180 / 180 | 26% | 1.43 | 113 / 430 |
liver | 84% | 1333.96 | 190 / 226 | 35% | 2.17 | 142 / 406 |
bladder | 90% | 2377.90 | 19 / 21 | 22% | 1.53 | 110 / 504 |
intestine | 96% | 2598.38 | 929 / 966 | 14% | 0.90 | 75 / 527 |
stomach | 95% | 1802.20 | 342 / 359 | 13% | 0.75 | 37 / 286 |
esophagus | 81% | 1854.37 | 1174 / 1445 | 22% | 1.41 | 40 / 183 |
spleen | 100% | 4083.71 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 3440.84 | 1325 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 2456.90 | 1173 / 1204 | 0% | 0 | 0 / 0 |
skin | 55% | 776.46 | 1000 / 1809 | 34% | 2.40 | 161 / 472 |
heart | 87% | 1513.44 | 745 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 45% | 3.13 | 13 / 29 |
tonsil | 0% | 0 | 0 / 0 | 44% | 3.13 | 20 / 45 |
eye | 0% | 0 | 0 / 0 | 31% | 2.80 | 25 / 80 |
muscle | 27% | 264.78 | 214 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 20% | 238.04 | 188 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005634 | Cellular component | nucleus |
GO_0008270 | Molecular function | zinc ion binding |
GO_0003677 | Molecular function | DNA binding |
Gene name | ZMAT1 |
Protein name | ZMAT1 protein (Zinc finger, matrin type 1) Zinc finger matrin-type protein 1 |
Synonyms | KIAA1789 |
Description | |
Accessions | Q5H9K5 A7MD47 ENST00000651725.2 [Q5H9K5-3] ENST00000540921.5 [Q5H9K5-1] ENST00000372782.4 [Q5H9K5-1] |