Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 7 studies | 24% ± 5% | |
endothelial cell | 7 studies | 27% ± 9% | |
glutamatergic neuron | 6 studies | 30% ± 15% | |
oligodendrocyte | 6 studies | 27% ± 9% | |
GABAergic neuron | 6 studies | 29% ± 10% | |
astrocyte | 6 studies | 33% ± 13% | |
fibroblast | 5 studies | 25% ± 11% | |
oligodendrocyte precursor cell | 5 studies | 26% ± 13% | |
macrophage | 5 studies | 27% ± 12% | |
interneuron | 5 studies | 41% ± 21% | |
dendritic cell | 4 studies | 17% ± 1% | |
amacrine cell | 4 studies | 23% ± 6% | |
retina horizontal cell | 4 studies | 22% ± 9% | |
retinal rod cell | 4 studies | 26% ± 5% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 5% | |
smooth muscle cell | 4 studies | 17% ± 1% | |
epithelial cell | 3 studies | 30% ± 17% | |
GABAergic amacrine cell | 3 studies | 23% ± 7% | |
Mueller cell | 3 studies | 23% ± 6% | |
glycinergic amacrine cell | 3 studies | 22% ± 2% | |
monocyte | 3 studies | 19% ± 2% | |
pericyte | 3 studies | 22% ± 10% | |
microglial cell | 3 studies | 28% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1321.56 | 459 / 459 | 99% | 12.42 | 1112 / 1118 |
esophagus | 100% | 1208.17 | 1445 / 1445 | 99% | 10.68 | 182 / 183 |
lung | 100% | 1266.61 | 577 / 578 | 99% | 7.96 | 1149 / 1155 |
thymus | 100% | 1258.81 | 653 / 653 | 99% | 8.71 | 599 / 605 |
prostate | 100% | 1307.13 | 245 / 245 | 99% | 10.58 | 497 / 502 |
ovary | 100% | 1250.57 | 180 / 180 | 99% | 6.52 | 425 / 430 |
brain | 99% | 683.66 | 2614 / 2642 | 100% | 7.95 | 704 / 705 |
bladder | 100% | 1318.81 | 21 / 21 | 98% | 7.96 | 493 / 504 |
pancreas | 99% | 531.15 | 325 / 328 | 98% | 7.60 | 175 / 178 |
uterus | 100% | 1210.29 | 170 / 170 | 97% | 8.40 | 447 / 459 |
stomach | 100% | 827.91 | 359 / 359 | 97% | 7.48 | 276 / 286 |
intestine | 100% | 1190.13 | 966 / 966 | 96% | 6.75 | 505 / 527 |
kidney | 100% | 767.63 | 89 / 89 | 95% | 8.95 | 859 / 901 |
adrenal gland | 100% | 815.61 | 258 / 258 | 93% | 4.98 | 214 / 230 |
skin | 100% | 1703.77 | 1808 / 1809 | 93% | 10.48 | 439 / 472 |
liver | 100% | 700.50 | 226 / 226 | 79% | 3.45 | 320 / 406 |
blood vessel | 100% | 1367.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.77 | 29 / 29 |
muscle | 100% | 874.57 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 912.66 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.26 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.18 | 1 / 1 |
adipose | 100% | 1409.85 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 96% | 632.66 | 830 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 1045.00 | 816 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 45% | 1.74 | 36 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF654 |
Protein name | Zinc finger protein 654 (Melanoma-associated antigen) |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. . |
Accessions | Q8IZM8 ENST00000636215.2 |