Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 27% ± 10% | |
GABAergic neuron | 5 studies | 29% ± 10% | |
B cell | 4 studies | 21% ± 4% | |
endothelial cell | 4 studies | 27% ± 8% | |
basal cell | 4 studies | 23% ± 5% | |
neuron | 4 studies | 26% ± 6% | |
glutamatergic neuron | 4 studies | 39% ± 12% | |
astrocyte | 4 studies | 19% ± 3% | |
interneuron | 4 studies | 28% ± 12% | |
oligodendrocyte | 4 studies | 22% ± 2% | |
microglial cell | 3 studies | 19% ± 1% | |
germinal center B cell | 3 studies | 23% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 7% | |
dendritic cell | 3 studies | 24% ± 6% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 32% ± 13% | |
erythroblast | 3 studies | 26% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 27% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1286.90 | 1445 / 1445 | 100% | 17.65 | 183 / 183 |
brain | 100% | 1414.06 | 2638 / 2642 | 100% | 22.45 | 705 / 705 |
ovary | 100% | 4435.47 | 180 / 180 | 100% | 13.62 | 428 / 430 |
lung | 100% | 1434.29 | 576 / 578 | 100% | 15.90 | 1153 / 1155 |
adrenal gland | 100% | 3027.46 | 258 / 258 | 99% | 13.25 | 228 / 230 |
breast | 100% | 1211.23 | 459 / 459 | 99% | 19.50 | 1108 / 1118 |
thymus | 100% | 1716.67 | 653 / 653 | 99% | 15.02 | 598 / 605 |
bladder | 100% | 1323.33 | 21 / 21 | 99% | 15.72 | 497 / 504 |
prostate | 100% | 1406.65 | 245 / 245 | 99% | 14.27 | 495 / 502 |
uterus | 100% | 1471.79 | 170 / 170 | 98% | 18.52 | 452 / 459 |
intestine | 100% | 1359.83 | 966 / 966 | 98% | 15.97 | 516 / 527 |
pancreas | 100% | 934.80 | 327 / 328 | 98% | 12.12 | 174 / 178 |
stomach | 100% | 916.17 | 358 / 359 | 97% | 15.99 | 278 / 286 |
kidney | 100% | 1260.03 | 89 / 89 | 96% | 10.16 | 861 / 901 |
skin | 100% | 1635.08 | 1806 / 1809 | 92% | 15.22 | 435 / 472 |
liver | 99% | 632.22 | 224 / 226 | 72% | 5.00 | 292 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.35 | 29 / 29 |
spleen | 100% | 1899.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.63 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.43 | 1 / 1 |
adipose | 100% | 1152.16 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1051.80 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 582.67 | 787 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 718.70 | 836 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 60% | 1307.40 | 560 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 48% | 2.75 | 38 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001835 | Biological process | blastocyst hatching |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005730 | Cellular component | nucleolus |
GO_0000776 | Cellular component | kinetochore |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0019899 | Molecular function | enzyme binding |
GO_0097110 | Molecular function | scaffold protein binding |
GO_0042826 | Molecular function | histone deacetylase binding |
GO_0043021 | Molecular function | ribonucleoprotein complex binding |
GO_0051219 | Molecular function | phosphoprotein binding |
GO_0005515 | Molecular function | protein binding |
GO_0042393 | Molecular function | histone binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0015631 | Molecular function | tubulin binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | PHF6 |
Protein name | PHD finger protein 6 (PHD-like zinc finger protein) Truncated PHF6 PHD finger protein 6 |
Synonyms | hCG_1783600 CENP-31 mutant KIAA1823 |
Description | FUNCTION: Transcriptional regulator that associates with ribosomal RNA promoters and suppresses ribosomal RNA (rRNA) transcription. . |
Accessions | A0A8I5KVG8 Q8IWS0 ENST00000685553.1 ENST00000332070.7 [Q8IWS0-1] ENST00000688598.1 [Q8IWS0-5] ENST00000691812.1 [Q8IWS0-1] A0A7D4XHZ3 ENST00000685047.1 ENST00000370803.8 [Q8IWS0-1] A0A8I5KWC2 ENST00000370800.4 [Q8IWS0-2] ENST00000625464.2 Q5JRC6 ENST00000693759.1 A0A8I5QJH7 A0A0D9SGE8 ENST00000370799.5 ENST00000687496.1 [Q8IWS0-5] |