Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 28% ± 8% | |
astrocyte | 4 studies | 29% ± 6% | |
oligodendrocyte | 4 studies | 23% ± 4% | |
endothelial cell | 3 studies | 21% ± 2% | |
GABAergic neuron | 3 studies | 43% ± 8% | |
glutamatergic neuron | 3 studies | 49% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 37% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1838.99 | 1445 / 1445 | 100% | 26.07 | 183 / 183 |
lung | 100% | 1923.90 | 578 / 578 | 100% | 20.62 | 1154 / 1155 |
prostate | 100% | 1727.04 | 245 / 245 | 100% | 18.45 | 501 / 502 |
intestine | 100% | 1748.59 | 966 / 966 | 100% | 17.46 | 525 / 527 |
breast | 100% | 2048.17 | 459 / 459 | 99% | 25.00 | 1111 / 1118 |
bladder | 100% | 1892.71 | 21 / 21 | 99% | 17.99 | 500 / 504 |
uterus | 100% | 1565.48 | 170 / 170 | 99% | 20.19 | 455 / 459 |
stomach | 100% | 1588.86 | 359 / 359 | 99% | 18.35 | 283 / 286 |
thymus | 100% | 1844.63 | 653 / 653 | 99% | 15.68 | 597 / 605 |
pancreas | 100% | 1021.41 | 328 / 328 | 98% | 13.11 | 175 / 178 |
ovary | 100% | 1956.79 | 180 / 180 | 98% | 12.89 | 422 / 430 |
kidney | 100% | 1363.90 | 89 / 89 | 98% | 15.59 | 883 / 901 |
brain | 98% | 999.59 | 2598 / 2642 | 99% | 20.76 | 697 / 705 |
skin | 100% | 2718.27 | 1809 / 1809 | 97% | 19.08 | 457 / 472 |
adrenal gland | 100% | 1558.82 | 258 / 258 | 92% | 11.44 | 211 / 230 |
liver | 100% | 1114.52 | 226 / 226 | 78% | 7.83 | 318 / 406 |
adipose | 100% | 2041.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1716.96 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1485.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.61 | 1 / 1 |
heart | 96% | 1050.52 | 823 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 12.72 | 26 / 29 |
eye | 0% | 0 | 0 / 0 | 88% | 10.49 | 70 / 80 |
peripheral blood | 71% | 882.61 | 657 / 929 | 0% | 0 | 0 / 0 |
muscle | 66% | 346.82 | 532 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0007399 | Biological process | nervous system development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005575 | Cellular component | cellular_component |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | ADNP2 |
Protein name | Activity-dependent neuroprotector homeobox protein 2 (ADNP homeobox protein 2) (Zinc finger protein 508) ADNP homeobox 2 |
Synonyms | KIAA0863 ZNF508 |
Description | FUNCTION: May be involved in transcriptional regulation. May play a role in neuronal function; perhaps involved in protection of brain tissues from oxidative stress. May be involved in erythroid differentiation (By similarity). . |
Accessions | ENST00000262198.9 K7ERT3 H0YLN6 ENST00000559951.5 K7EPG1 ENST00000560561.1 H0YM09 Q6IQ32 ENST00000560752.5 ENST00000561195.1 |