Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal bipolar neuron | 4 studies | 40% ± 14% | |
rod bipolar cell | 3 studies | 71% ± 20% |
Insufficient scRNA-seq data for expression of TRNP1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 95% | 987.39 | 312 / 328 | 98% | 112.30 | 175 / 178 |
esophagus | 100% | 3226.65 | 1444 / 1445 | 92% | 84.96 | 168 / 183 |
skin | 96% | 4056.93 | 1734 / 1809 | 95% | 49.03 | 450 / 472 |
brain | 93% | 1786.28 | 2455 / 2642 | 85% | 22.76 | 600 / 705 |
bladder | 100% | 1501.48 | 21 / 21 | 73% | 39.28 | 368 / 504 |
stomach | 100% | 3946.58 | 359 / 359 | 67% | 77.55 | 191 / 286 |
lung | 93% | 780.73 | 539 / 578 | 72% | 38.60 | 829 / 1155 |
uterus | 96% | 1236.61 | 164 / 170 | 68% | 29.72 | 310 / 459 |
prostate | 95% | 857.15 | 233 / 245 | 64% | 9.10 | 321 / 502 |
breast | 88% | 751.44 | 405 / 459 | 59% | 11.23 | 663 / 1118 |
intestine | 82% | 856.95 | 793 / 966 | 60% | 46.22 | 315 / 527 |
kidney | 98% | 1552.21 | 87 / 89 | 37% | 17.58 | 335 / 901 |
ovary | 36% | 249.47 | 64 / 180 | 94% | 52.30 | 406 / 430 |
thymus | 55% | 268.73 | 362 / 653 | 58% | 13.44 | 352 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 110.36 | 1 / 1 |
blood vessel | 99% | 1529.54 | 1326 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 43% | 203.81 | 112 / 258 | 54% | 12.68 | 125 / 230 |
heart | 93% | 1277.76 | 797 / 861 | 0% | 0 | 0 / 0 |
adipose | 89% | 773.57 | 1069 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 18.44 | 68 / 80 |
liver | 16% | 105.75 | 37 / 226 | 61% | 36.43 | 246 / 406 |
spleen | 71% | 362.79 | 170 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 62% | 29.46 | 28 / 45 |
muscle | 3% | 10.01 | 21 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.77 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0061351 | Biological process | neural precursor cell proliferation |
GO_0021696 | Biological process | cerebellar cortex morphogenesis |
GO_0042127 | Biological process | regulation of cell population proliferation |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0000791 | Cellular component | euchromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
Gene name | TRNP1 |
Protein name | TMF-regulated nuclear protein 1 TMF1 regulated nuclear protein 1 |
Synonyms | C1orf225 TRNP |
Description | FUNCTION: DNA-binding factor that regulates the expression of a subset of genes and plays a key role in tangential, radial, and lateral expansion of the brain neocortex. Regulates neural stem cells proliferation and the production of intermediate neural progenitors and basal radial glial cells affecting the process of cerebral cortex gyrification. May control the proliferation rate of cells by regulating their progression through key cell-cycle transition points (By similarity). . |
Accessions | ENST00000522111.3 H0YES3 Q6NT89 ENST00000531285.1 A0A8E5N8C3 |