Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 35% ± 16% | |
astrocyte | 4 studies | 20% ± 5% | |
granule cell | 3 studies | 53% ± 18% | |
interneuron | 3 studies | 32% ± 10% | |
ciliated cell | 3 studies | 22% ± 5% | |
GABAergic neuron | 3 studies | 22% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 30% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12133.70 | 2640 / 2642 | 100% | 92.06 | 703 / 705 |
prostate | 99% | 1558.89 | 243 / 245 | 99% | 36.97 | 497 / 502 |
thymus | 100% | 1453.17 | 652 / 653 | 98% | 31.80 | 593 / 605 |
intestine | 100% | 1838.70 | 965 / 966 | 96% | 36.94 | 508 / 527 |
kidney | 98% | 1377.34 | 87 / 89 | 98% | 33.03 | 879 / 901 |
liver | 100% | 1789.14 | 225 / 226 | 94% | 31.35 | 381 / 406 |
pancreas | 100% | 2426.85 | 328 / 328 | 93% | 23.09 | 166 / 178 |
stomach | 100% | 1609.79 | 359 / 359 | 91% | 30.41 | 261 / 286 |
lung | 99% | 1670.67 | 570 / 578 | 90% | 31.47 | 1038 / 1155 |
breast | 100% | 1804.69 | 459 / 459 | 80% | 81.40 | 898 / 1118 |
esophagus | 96% | 1281.18 | 1385 / 1445 | 82% | 23.15 | 150 / 183 |
uterus | 97% | 1333.89 | 165 / 170 | 80% | 22.73 | 368 / 459 |
bladder | 100% | 1847.52 | 21 / 21 | 76% | 22.72 | 381 / 504 |
adrenal gland | 91% | 914.28 | 236 / 258 | 77% | 16.95 | 178 / 230 |
skin | 92% | 1215.56 | 1659 / 1809 | 70% | 14.82 | 332 / 472 |
ovary | 99% | 1152.32 | 178 / 180 | 49% | 8.65 | 211 / 430 |
spleen | 100% | 3478.09 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 4798.56 | 802 / 803 | 0% | 0 | 0 / 0 |
adipose | 99% | 1670.13 | 1192 / 1204 | 0% | 0 | 0 / 0 |
heart | 95% | 1223.87 | 816 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 1158.55 | 1256 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 2358.92 | 828 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 22.85 | 35 / 45 |
lymph node | 0% | 0 | 0 / 0 | 76% | 16.98 | 22 / 29 |
eye | 0% | 0 | 0 / 0 | 15% | 2.45 | 12 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007519 | Biological process | skeletal muscle tissue development |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000792 | Cellular component | heterochromatin |
GO_0016607 | Cellular component | nuclear speck |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZBTB18 |
Protein name | Zinc finger and BTB domain-containing protein 18 (58 kDa repressor protein) (Transcriptional repressor RP58) (Translin-associated zinc finger protein 1) (TAZ-1) (Zinc finger protein 238) (Zinc finger protein C2H2-171) Zinc finger and BTB domain containing 18 |
Synonyms | TAZ1 RP58 ZNF238 |
Description | FUNCTION: Transcriptional repressor that plays a role in various developmental processes such as myogenesis and brain development. Plays a key role in myogenesis by directly repressing the expression of ID2 and ID3, 2 inhibitors of skeletal myogenesis. Also involved in controlling cell division of progenitor cells and regulating the survival of postmitotic cortical neurons. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes. May also play a role in the organization of chromosomes in the nucleus. . |
Accessions | ENST00000696616.1 [Q99592-1] A0A8V8TM03 ENST00000698634.1 Q99592 ENST00000696615.1 A0A8Q3WLX6 ENST00000358704.4 [Q99592-2] ENST00000622512.1 [Q99592-1] ENST00000696618.1 [Q99592-1] ENST00000696617.1 A0A8Q3WLD9 |