Name | Number of supported studies | Average coverage | |
---|---|---|---|
type I pneumocyte | 4 studies | 20% ± 2% | |
epithelial cell | 4 studies | 24% ± 6% | |
GABAergic neuron | 3 studies | 27% ± 5% | |
glutamatergic neuron | 3 studies | 33% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 4% | |
dendritic cell | 3 studies | 24% ± 7% | |
oligodendrocyte | 3 studies | 22% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3757.47 | 1445 / 1445 | 100% | 40.47 | 183 / 183 |
brain | 100% | 4506.44 | 2641 / 2642 | 100% | 44.68 | 705 / 705 |
lung | 100% | 4891.49 | 578 / 578 | 100% | 38.10 | 1153 / 1155 |
breast | 100% | 3166.69 | 459 / 459 | 100% | 55.66 | 1116 / 1118 |
bladder | 100% | 3968.33 | 21 / 21 | 100% | 44.09 | 503 / 504 |
ovary | 100% | 3668.06 | 180 / 180 | 100% | 38.03 | 429 / 430 |
intestine | 100% | 3476.39 | 966 / 966 | 100% | 29.17 | 525 / 527 |
skin | 100% | 4236.12 | 1809 / 1809 | 100% | 42.30 | 470 / 472 |
uterus | 100% | 3833.73 | 170 / 170 | 99% | 38.66 | 455 / 459 |
stomach | 100% | 2535.72 | 359 / 359 | 99% | 30.35 | 283 / 286 |
pancreas | 100% | 2027.14 | 328 / 328 | 99% | 30.85 | 176 / 178 |
prostate | 100% | 3355.81 | 245 / 245 | 99% | 19.41 | 495 / 502 |
thymus | 100% | 3396.55 | 653 / 653 | 99% | 23.83 | 596 / 605 |
kidney | 100% | 3017.47 | 89 / 89 | 97% | 24.77 | 872 / 901 |
liver | 100% | 1461.24 | 225 / 226 | 87% | 19.68 | 355 / 406 |
adrenal gland | 100% | 2189.13 | 258 / 258 | 84% | 15.47 | 194 / 230 |
adipose | 100% | 3115.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3717.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.57 | 29 / 29 |
spleen | 100% | 3543.81 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 33.91 | 1 / 1 |
heart | 99% | 1958.80 | 849 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 23.49 | 77 / 80 |
muscle | 92% | 998.41 | 735 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 84% | 1839.37 | 781 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | POGK |
Protein name | Pogo transposable element derived with KRAB domain Pogo transposable element with KRAB domain |
Synonyms | SLTP003 KIAA1513 LST003 |
Description | |
Accessions | Q9P215 ENST00000449930.5 ENST00000367876.9 Q5TIJ2 ENST00000367875.1 |