Insufficient scRNA-seq data for expression of POLR1E at single-cell level.
Insufficient scRNA-seq data for expression of POLR1E at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1766.53 | 459 / 459 | 100% | 37.92 | 1118 / 1118 |
esophagus | 100% | 1158.90 | 1445 / 1445 | 100% | 27.37 | 183 / 183 |
ovary | 100% | 2457.50 | 180 / 180 | 100% | 28.19 | 430 / 430 |
prostate | 100% | 1341.90 | 245 / 245 | 100% | 33.52 | 502 / 502 |
skin | 100% | 1749.98 | 1809 / 1809 | 100% | 40.28 | 472 / 472 |
stomach | 100% | 1088.42 | 359 / 359 | 100% | 30.62 | 286 / 286 |
intestine | 100% | 1274.37 | 964 / 966 | 100% | 35.49 | 527 / 527 |
uterus | 100% | 2133.09 | 170 / 170 | 100% | 41.52 | 458 / 459 |
lung | 100% | 1102.76 | 576 / 578 | 100% | 27.99 | 1155 / 1155 |
liver | 100% | 993.90 | 226 / 226 | 100% | 19.75 | 404 / 406 |
bladder | 100% | 1645.90 | 21 / 21 | 99% | 30.91 | 501 / 504 |
pancreas | 99% | 1430.29 | 326 / 328 | 100% | 24.27 | 178 / 178 |
thymus | 100% | 993.04 | 651 / 653 | 100% | 33.04 | 603 / 605 |
brain | 99% | 728.65 | 2611 / 2642 | 100% | 38.44 | 705 / 705 |
adrenal gland | 100% | 1286.15 | 258 / 258 | 96% | 21.14 | 220 / 230 |
kidney | 98% | 651.08 | 87 / 89 | 96% | 24.08 | 869 / 901 |
adipose | 100% | 1783.57 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1512.30 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 60.52 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 75.61 | 29 / 29 |
spleen | 100% | 902.01 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.87 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.41 | 1 / 1 |
muscle | 100% | 971.28 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 666.93 | 806 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 76% | 1008.40 | 709 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006362 | Biological process | transcription elongation by RNA polymerase I |
GO_0001188 | Biological process | RNA polymerase I preinitiation complex assembly |
GO_0042790 | Biological process | nucleolar large rRNA transcription by RNA polymerase I |
GO_0006361 | Biological process | transcription initiation at RNA polymerase I promoter |
GO_0005736 | Cellular component | RNA polymerase I complex |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0003677 | Molecular function | DNA binding |
GO_0001179 | Molecular function | RNA polymerase I general transcription initiation factor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | POLR1E |
Protein name | DNA-directed RNA polymerase I subunit RPA49 (RNA polymerase I subunit A49) (DNA-directed RNA polymerase I subunit E) (RNA polymerase I-associated factor 1) (RNA polymerase I-associated factor 53) RNA polymerase I subunit E |
Synonyms | PAF53 PRAF1 |
Description | FUNCTION: Component of RNA polymerase I (Pol I), a DNA-dependent RNA polymerase which synthesizes ribosomal RNA precursors using the four ribonucleoside triphosphates as substrates . Appears to be involved in the formation of the initiation complex at the promoter by mediating the interaction between Pol I and UBTF/UBF . . |
Accessions | E7EX70 Q9GZS1 ENST00000377798.9 [Q9GZS1-2] ENST00000442009.6 ENST00000377792.3 [Q9GZS1-1] |