Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 100% | 4897.79 | 966 / 966 | 99% | 16.08 | 524 / 527 |
stomach | 100% | 3003.25 | 358 / 359 | 99% | 18.20 | 284 / 286 |
thymus | 100% | 2779.31 | 650 / 653 | 99% | 22.23 | 599 / 605 |
lung | 100% | 7754.52 | 578 / 578 | 97% | 15.30 | 1124 / 1155 |
prostate | 100% | 3523.48 | 244 / 245 | 97% | 9.51 | 489 / 502 |
uterus | 100% | 9838.28 | 170 / 170 | 97% | 11.99 | 443 / 459 |
breast | 100% | 4224.02 | 459 / 459 | 96% | 12.83 | 1076 / 1118 |
bladder | 100% | 3812.81 | 21 / 21 | 94% | 10.92 | 472 / 504 |
esophagus | 95% | 1948.49 | 1372 / 1445 | 98% | 14.60 | 179 / 183 |
ovary | 100% | 5350.81 | 180 / 180 | 92% | 10.46 | 396 / 430 |
skin | 86% | 1416.37 | 1550 / 1809 | 95% | 16.22 | 447 / 472 |
kidney | 81% | 1707.35 | 72 / 89 | 93% | 12.31 | 834 / 901 |
brain | 73% | 1173.40 | 1933 / 2642 | 99% | 14.38 | 697 / 705 |
adrenal gland | 89% | 1385.15 | 230 / 258 | 80% | 13.29 | 185 / 230 |
liver | 97% | 1987.21 | 219 / 226 | 67% | 5.39 | 273 / 406 |
pancreas | 62% | 960.02 | 202 / 328 | 96% | 14.62 | 171 / 178 |
adipose | 100% | 5158.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 87.69 | 29 / 29 |
peripheral blood | 100% | 23785.65 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 21255.60 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3141.59 | 1332 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 10.59 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 20.26 | 44 / 45 |
heart | 58% | 798.39 | 496 / 861 | 0% | 0 | 0 / 0 |
muscle | 6% | 63.40 | 47 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001837 | Biological process | epithelial to mesenchymal transition |
GO_0021849 | Biological process | neuroblast division in subventricular zone |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0060232 | Biological process | delamination |
GO_0060234 | Biological process | neuroblast delamination |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005814 | Cellular component | centriole |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005874 | Cellular component | microtubule |
GO_0001650 | Cellular component | fibrillar center |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AKNA |
Protein name | AKNA transcript C1 AKNA transcript B1 Microtubule organization protein AKNA (AT-hook-containing transcription factor) AKNA transcript C2 AKNA transcript F2 |
Synonyms | KIAA1968 |
Description | FUNCTION: Centrosomal protein that plays a key role in cell delamination by regulating microtubule organization (By similarity). Required for the delamination and retention of neural stem cells from the subventricular zone during neurogenesis (By similarity). Also regulates the epithelial-to-mesenchymal transition in other epithelial cells (By similarity). Acts by increasing centrosomal microtubule nucleation and recruiting nucleation factors and minus-end stabilizers, thereby destabilizing microtubules at the adherens junctions and mediating constriction of the apical endfoot (By similarity). In addition, may also act as a transcription factor that specifically activates the expression of the CD40 receptor and its ligand CD40L/CD154, two cell surface molecules on lymphocytes that are critical for antigen-dependent-B-cell development . Binds to A/T-rich promoters . It is unclear how it can both act as a microtubule organizer and as a transcription factor; additional evidences are required to reconcile these two apparently contradictory functions (Probable). . |
Accessions | Q7Z591 ENST00000374088.8 [Q7Z591-1] Q64FY1 ENST00000312033.3 [Q7Z591-3] ENST00000307564.8 [Q7Z591-1] Q64FX5 Q64FX9 ENST00000374079.8 [Q7Z591-4] ENST00000223791.7 [Q7Z591-8] Q64FY0 ENST00000374075.9 [Q7Z591-2] |