Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 28% ± 7% | |
dendritic cell | 3 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 19% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2242.17 | 459 / 459 | 100% | 61.78 | 1118 / 1118 |
esophagus | 100% | 2085.17 | 1445 / 1445 | 100% | 35.79 | 183 / 183 |
intestine | 100% | 2092.70 | 966 / 966 | 100% | 49.53 | 527 / 527 |
ovary | 100% | 2022.20 | 180 / 180 | 100% | 46.84 | 430 / 430 |
stomach | 100% | 1481.92 | 359 / 359 | 100% | 43.24 | 286 / 286 |
uterus | 100% | 2464.59 | 170 / 170 | 100% | 67.12 | 459 / 459 |
brain | 100% | 1973.34 | 2641 / 2642 | 100% | 71.71 | 705 / 705 |
bladder | 100% | 2221.86 | 21 / 21 | 100% | 53.90 | 503 / 504 |
prostate | 100% | 1789.78 | 245 / 245 | 100% | 49.55 | 501 / 502 |
skin | 100% | 2671.23 | 1809 / 1809 | 100% | 61.49 | 471 / 472 |
thymus | 100% | 1853.84 | 653 / 653 | 100% | 55.06 | 603 / 605 |
lung | 99% | 1615.27 | 575 / 578 | 100% | 51.29 | 1155 / 1155 |
kidney | 100% | 1450.84 | 89 / 89 | 99% | 34.54 | 888 / 901 |
liver | 100% | 925.36 | 226 / 226 | 98% | 24.64 | 396 / 406 |
pancreas | 98% | 931.45 | 322 / 328 | 99% | 42.11 | 176 / 178 |
adrenal gland | 100% | 1648.53 | 258 / 258 | 97% | 30.52 | 222 / 230 |
adipose | 100% | 2217.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2136.48 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 57.60 | 29 / 29 |
spleen | 100% | 2028.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 62.15 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 41.12 | 1 / 1 |
muscle | 100% | 1311.69 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1138.90 | 841 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 30.99 | 76 / 80 |
peripheral blood | 88% | 1501.81 | 821 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0006401 | Biological process | RNA catabolic process |
GO_0008283 | Biological process | cell population proliferation |
GO_0035308 | Biological process | negative regulation of protein dephosphorylation |
GO_0016607 | Cellular component | nuclear speck |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008995 | Molecular function | ribonuclease E activity |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0004519 | Molecular function | endonuclease activity |
GO_0003729 | Molecular function | mRNA binding |
GO_0004865 | Molecular function | protein serine/threonine phosphatase inhibitor activity |
GO_0140678 | Molecular function | molecular function inhibitor activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | PPP1R8 |
Protein name | Protein phosphatase 1 regulatory subunit 8 PPP1R8 protein (Protein phosphatase 1, regulatory (Inhibitor) subunit 8, isoform CRA_f) (cDNA FLJ60722, highly similar to Nuclear inhibitor of protein phosphatase 1) (cDNA, FLJ94432, Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit8 (PPP1R8), transcript variant 3, mRNA) Protein phosphatase 1 regulatory subunit 8 testis splice variant Protein phosphatase 1, regulatory (Inhibitor) subunit 8 Nuclear inhibitor of protein phosphatase 1 (NIPP-1) (Protein phosphatase 1 regulatory inhibitor subunit 8) [Includes: Activator of RNA decay (EC 3.1.4.-) (ARD-1)] |
Synonyms | NIPP1 ARD1 hCG_2032356 |
Description | FUNCTION: Inhibitor subunit of the major nuclear protein phosphatase-1 (PP-1). It has RNA-binding activity but does not cleave RNA and may target PP-1 to RNA-associated substrates. May also be involved in pre-mRNA splicing. Binds DNA and might act as a transcriptional repressor. Seems to be required for cell proliferation.; FUNCTION: Isoform Gamma is a site-specific single-strand endoribonuclease that cleaves single strand RNA 3' to purines and pyrimidines in A+U-rich regions. It generates 5'-phosphate termini at the site of cleavage. This isoform does not inhibit PP-1. May be implicated in mRNA splicing. |
Accessions | ENST00000431586.1 Q561W4 A0A0A0MT09 Q6ICT4 Q12972 ENST00000311772.10 [Q12972-1] ENST00000236412.11 [Q12972-3] Q38J66 ENST00000373931.8 [Q12972-2] |