HNF1A report

I. Expression across cell types

Insufficient scRNA-seq data for expression of HNF1A at single-cell level.

II. Expression across tissues

sc-RNAseq data

Insufficient scRNA-seq data for expression of HNF1A at tissue level.

III. Associated gene sets

GO_0031016Biological processpancreas development
GO_0035565Biological processregulation of pronephros size
GO_0006357Biological processregulation of transcription by RNA polymerase II
GO_0035623Biological processrenal glucose absorption
GO_0001889Biological processliver development
GO_0060261Biological processpositive regulation of transcription initiation by RNA polymerase II
GO_0045893Biological processpositive regulation of DNA-templated transcription
GO_0030073Biological processinsulin secretion
GO_0046323Biological processglucose import
GO_0042593Biological processglucose homeostasis
GO_0045944Biological processpositive regulation of transcription by RNA polymerase II
GO_0032991Cellular componentprotein-containing complex
GO_0005737Cellular componentcytoplasm
GO_0000785Cellular componentchromatin
GO_0005634Cellular componentnucleus
GO_0003677Molecular functionDNA binding
GO_0000978Molecular functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0001228Molecular functionDNA-binding transcription activator activity, RNA polymerase II-specific
GO_0000981Molecular functionDNA-binding transcription factor activity, RNA polymerase II-specific
GO_0000976Molecular functiontranscription cis-regulatory region binding
GO_0003700Molecular functionDNA-binding transcription factor activity
GO_0046983Molecular functionprotein dimerization activity
GO_0005515Molecular functionprotein binding

IV. Literature review

[source]
Gene nameHNF1A
Protein nameHNF1 alpha A splice variant 3
HNF1 homeobox A (Transcription factor 1, hepatic LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor, isoform CRA_b)
Hepatocyte nuclear factor 1-alpha (HNF-1-alpha) (HNF-1A) (Liver-specific transcription factor LF-B1) (LFB1) (Transcription factor 1) (TCF-1)
HNF1 alpha A splice variant 2 (HNF1 homeobox A)
HNF1 alpha A splice variant 5
HNF1 alpha A splice variant 7
HNF1 alpha B splice variant 6
HNF1 alpha A splice variant 4
HNF1 alpha B splice variant 3 (HNF1 alpha B splice variant 5)
HNF1 alpha A splice variant 6
HNF1 alpha A splice variant 1
HNF1 alpha A splice variant 8
HNF1 homeobox A
SynonymshCG_27361
TCF1
DescriptionFUNCTION: Transcriptional activator that regulates the tissue specific expression of multiple genes, especially in pancreatic islet cells and in liver (By similarity). Binds to the inverted palindrome 5'-GTTAATNATTAAC-3' . Activates the transcription of CYP1A2, CYP2E1 and CYP3A11 (By similarity). .; FUNCTION: (Microbial infection) Plays a crucial role for hepatitis B virus gene transcription and DNA replication. Mechanistically, synergistically cooperates with NR5A2 to up-regulate the activity of one of the critical cis-elements in the hepatitis B virus genome enhancer II (ENII). .

AccessionsENST00000538646.5 [P20823-4]
U3KQS6
E0YMI9
ENST00000541395.5
E0YMK2
ENST00000544574.5
ENST00000544413.2
E0YMJ4
F5H0K0
E0YMJ2
E0YMK3
E0YMJ0
ENST00000541924.5 [P20823-5]
F5H3Z5
A0A0A0MTK8
P20823
ENST00000257555.11
E0YMI7
E0YMI8
E0YMJ3
ENST00000400024.6
A0A0A0MQU7
E0YMJ1
ENST00000560968.6
ENST00000540108.1 [P20823-8]