Insufficient scRNA-seq data for expression of SOHLH1 at single-cell level.
Insufficient scRNA-seq data for expression of SOHLH1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 71% | 733.28 | 1880 / 2642 | 41% | 2.31 | 289 / 705 |
adrenal gland | 0% | 0 | 0 / 258 | 23% | 3.41 | 52 / 230 |
lung | 0% | 0 | 0 / 578 | 19% | 3.29 | 225 / 1155 |
esophagus | 0% | 0.10 | 1 / 1445 | 13% | 1.05 | 23 / 183 |
uterus | 0% | 0 | 0 / 170 | 12% | 3.75 | 56 / 459 |
tonsil | 0% | 0 | 0 / 0 | 11% | 7.14 | 5 / 45 |
lymph node | 0% | 0 | 0 / 0 | 7% | 4.98 | 2 / 29 |
skin | 3% | 3.88 | 46 / 1809 | 4% | 0.51 | 18 / 472 |
thymus | 0% | 0 | 0 / 653 | 5% | 3.30 | 31 / 605 |
bladder | 0% | 0 | 0 / 21 | 5% | 0.93 | 23 / 504 |
stomach | 0% | 0 | 0 / 359 | 5% | 0.37 | 13 / 286 |
ovary | 1% | 1.46 | 2 / 180 | 3% | 0.12 | 13 / 430 |
breast | 0% | 0 | 0 / 459 | 3% | 0.19 | 38 / 1118 |
intestine | 0% | 0 | 0 / 966 | 2% | 0.39 | 11 / 527 |
liver | 0% | 0 | 0 / 226 | 2% | 0.46 | 7 / 406 |
prostate | 0% | 0.67 | 1 / 245 | 1% | 0.01 | 3 / 502 |
kidney | 0% | 0 | 0 / 89 | 1% | 0.04 | 6 / 901 |
pancreas | 0% | 0 | 0 / 328 | 1% | 0.35 | 1 / 178 |
spleen | 0% | 0.51 | 1 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0009994 | Biological process | oocyte differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | SOHLH1 |
Protein name | Spermatogenesis and oogenesis specific basic helix-loop-helix 1 Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 |
Synonyms | TEB2 C9orf157 NOHLH |
Description | FUNCTION: Transcription regulator of both male and female germline differentiation. Suppresses genes involved in spermatogonial stem cells maintenance, and induces genes important for spermatogonial differentiation. Coordinates oocyte differentiation without affecting meiosis I (By similarity). . |
Accessions | A0A669KBI8 ENST00000673731.1 ENST00000298466.9 [Q5JUK2-1] Q5JUK2 ENST00000425225.2 [Q5JUK2-2] |