Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2978.90 | 1445 / 1445 | 100% | 23.91 | 183 / 183 |
lung | 100% | 2945.40 | 578 / 578 | 100% | 18.36 | 1153 / 1155 |
breast | 100% | 2955.05 | 459 / 459 | 99% | 23.49 | 1112 / 1118 |
prostate | 100% | 2839.82 | 245 / 245 | 99% | 17.19 | 499 / 502 |
brain | 99% | 1810.48 | 2627 / 2642 | 100% | 18.43 | 704 / 705 |
bladder | 100% | 3147.24 | 21 / 21 | 99% | 18.33 | 500 / 504 |
thymus | 100% | 2493.99 | 653 / 653 | 99% | 20.25 | 600 / 605 |
ovary | 100% | 4228.48 | 180 / 180 | 99% | 11.35 | 425 / 430 |
uterus | 100% | 3552.27 | 170 / 170 | 99% | 22.81 | 453 / 459 |
intestine | 100% | 2687.61 | 966 / 966 | 99% | 14.76 | 520 / 527 |
pancreas | 99% | 1232.34 | 326 / 328 | 99% | 16.32 | 176 / 178 |
stomach | 100% | 1914.92 | 359 / 359 | 98% | 15.52 | 281 / 286 |
kidney | 100% | 1489.17 | 89 / 89 | 97% | 15.74 | 875 / 901 |
skin | 100% | 3198.33 | 1809 / 1809 | 96% | 18.97 | 452 / 472 |
adrenal gland | 100% | 1840.38 | 258 / 258 | 94% | 9.48 | 217 / 230 |
liver | 100% | 1376.91 | 226 / 226 | 89% | 7.97 | 362 / 406 |
blood vessel | 100% | 3072.45 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2546.19 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2782.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.97 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.54 | 1 / 1 |
adipose | 100% | 2942.89 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1495.44 | 847 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 15.45 | 27 / 29 |
peripheral blood | 92% | 1772.90 | 854 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 7.83 | 61 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018105 | Biological process | peptidyl-serine phosphorylation |
GO_2000774 | Biological process | positive regulation of cellular senescence |
GO_0048147 | Biological process | negative regulation of fibroblast proliferation |
GO_0009791 | Biological process | post-embryonic development |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0051457 | Biological process | maintenance of protein location in nucleus |
GO_0050821 | Biological process | protein stabilization |
GO_0032688 | Biological process | negative regulation of interferon-beta production |
GO_0006468 | Biological process | protein phosphorylation |
GO_0140374 | Biological process | antiviral innate immune response |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016363 | Cellular component | nuclear matrix |
GO_0016605 | Cellular component | PML body |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0035064 | Molecular function | methylated histone binding |
GO_0003677 | Molecular function | DNA binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | MORC3 |
Protein name | MORC family CW-type zinc finger 3 MORC family CW-type zinc finger protein 3 (Nuclear matrix protein 2) (Zinc finger CW-type coiled-coil domain protein 3) MORC3 protein |
Synonyms | NXP2 ZCWCC3 KIAA0136 |
Description | FUNCTION: Nuclear matrix protein which forms MORC3-NBs (nuclear bodies) via an ATP-dependent mechanism and plays a role in innate immunity by restricting different viruses through modulation of the IFN response . Mechanistically, possesses a primary antiviral function through a MORC3-regulated element that activates IFNB1, and this function is guarded by a secondary IFN-repressing function . Sumoylated MORC3-NBs associates with PML-NBs and recruits TP53 and SP100, thus regulating TP53 activity . Binds RNA in vitro . Histone methylation reader which binds to non-methylated (H3K4me0), monomethylated (H3K4me1), dimethylated (H3K4me2) and trimethylated (H3K4me3) 'Lys-4' on histone H3 . The order of binding preference is H3K4me3 > H3K4me2 > H3K4me1 > H3K4me0 . .; FUNCTION: (Microbial infection) May be required for influenza A transcription during viral infection . . |
Accessions | Q14149 A2RU29 ENST00000546482.5 Q86YD6 ENST00000551788.5 ENST00000549948.5 H0YIR5 ENST00000552581.5 Q4VBZ9 ENST00000400485.6 H0YHQ4 |