I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 22% ± 8% | |
| glutamatergic neuron | 4 studies | 37% ± 12% | |
| GABAergic neuron | 3 studies | 35% ± 4% | |
| oligodendrocyte | 3 studies | 19% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 22% ± 8% | |
| glutamatergic neuron | 4 studies | 37% ± 12% | |
| GABAergic neuron | 3 studies | 35% ± 4% | |
| oligodendrocyte | 3 studies | 19% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 28% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 950.32 | 459 / 459 | 100% | 7.57 | 1118 / 1118 |
| esophagus | 100% | 859.54 | 1445 / 1445 | 100% | 10.25 | 183 / 183 |
| lung | 100% | 936.19 | 577 / 578 | 100% | 6.45 | 1155 / 1155 |
| bladder | 100% | 811.00 | 21 / 21 | 100% | 5.62 | 503 / 504 |
| prostate | 100% | 847.23 | 245 / 245 | 100% | 7.29 | 501 / 502 |
| ovary | 100% | 908.91 | 180 / 180 | 100% | 5.26 | 429 / 430 |
| stomach | 100% | 631.60 | 359 / 359 | 100% | 7.04 | 285 / 286 |
| intestine | 100% | 874.67 | 966 / 966 | 100% | 6.54 | 525 / 527 |
| uterus | 100% | 927.72 | 170 / 170 | 99% | 5.66 | 456 / 459 |
| thymus | 100% | 960.12 | 653 / 653 | 99% | 6.14 | 601 / 605 |
| pancreas | 99% | 486.05 | 326 / 328 | 99% | 5.72 | 177 / 178 |
| brain | 98% | 914.74 | 2602 / 2642 | 100% | 7.09 | 705 / 705 |
| kidney | 100% | 606.97 | 89 / 89 | 98% | 4.51 | 882 / 901 |
| adrenal gland | 100% | 710.38 | 258 / 258 | 97% | 3.76 | 224 / 230 |
| skin | 100% | 1058.72 | 1808 / 1809 | 97% | 5.15 | 456 / 472 |
| liver | 100% | 548.92 | 226 / 226 | 94% | 3.05 | 383 / 406 |
| adipose | 100% | 844.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 796.03 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 6.06 | 29 / 29 |
| spleen | 100% | 928.97 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 5.97 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.89 | 1 / 1 |
| muscle | 100% | 1182.83 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 94% | 385.57 | 812 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 94% | 628.83 | 873 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 91% | 3.96 | 73 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
| GO_0032259 | Biological process | methylation |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0000785 | Cellular component | chromatin |
| GO_0017053 | Cellular component | transcription repressor complex |
| GO_0005634 | Cellular component | nucleus |
| GO_0003677 | Molecular function | DNA binding |
| GO_0003700 | Molecular function | DNA-binding transcription factor activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0008168 | Molecular function | methyltransferase activity |
| Gene name | PRDM10 |
| Protein name | PR/SET domain 10 PR domain zinc finger protein 10 (EC 2.1.1.-) (PR domain-containing protein 10) (Tristanin) PR domain zinc finger protein 10 (PR domain-containing protein 10) |
| Synonyms | KIAA1231 PFM7 TRIS |
| Description | FUNCTION: Acts as a transcriptional activator of FLNC expression. . FUNCTION: May be involved in transcriptional regulation. . FUNCTION: May be involved in transcriptional regulation. . FUNCTION: May be involved in transcriptional regulation. . |
| Accessions | Q9NQV6 ENST00000527581.5 ENST00000358825.9 [Q9NQV6-7] ENST00000304538.10 [Q9NQV6-2] ENST00000528746.5 ENST00000531431.1 B7ZL72 E9PLV1 ENST00000526082.5 [Q9NQV6-5] E9PIB4 E9PS52 ENST00000360871.8 [Q9NQV6-4] ENST00000423662.6 [Q9NQV6-1] A0A2Z2E6H7 |
