Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 24% ± 5% | |
goblet cell | 3 studies | 16% ± 1% |
Insufficient scRNA-seq data for expression of CAMSAP3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 3194.62 | 226 / 226 | 98% | 25.38 | 399 / 406 |
pancreas | 100% | 2788.29 | 328 / 328 | 98% | 25.79 | 174 / 178 |
thymus | 100% | 2915.44 | 650 / 653 | 87% | 22.07 | 529 / 605 |
prostate | 87% | 2661.80 | 213 / 245 | 100% | 51.06 | 500 / 502 |
kidney | 100% | 2636.65 | 89 / 89 | 86% | 14.88 | 771 / 901 |
stomach | 75% | 2696.27 | 269 / 359 | 97% | 45.09 | 276 / 286 |
lung | 67% | 1103.37 | 389 / 578 | 93% | 25.55 | 1072 / 1155 |
breast | 56% | 1394.05 | 255 / 459 | 98% | 32.68 | 1092 / 1118 |
adrenal gland | 69% | 638.29 | 177 / 258 | 82% | 13.73 | 188 / 230 |
brain | 82% | 1822.07 | 2160 / 2642 | 63% | 10.14 | 441 / 705 |
intestine | 43% | 1552.02 | 418 / 966 | 98% | 44.55 | 515 / 527 |
esophagus | 38% | 1817.68 | 556 / 1445 | 97% | 41.30 | 178 / 183 |
bladder | 33% | 692.95 | 7 / 21 | 93% | 31.34 | 469 / 504 |
ovary | 2% | 16.38 | 4 / 180 | 98% | 42.42 | 422 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 35.99 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 93% | 23.61 | 42 / 45 |
uterus | 6% | 132.43 | 11 / 170 | 84% | 21.60 | 387 / 459 |
skin | 72% | 9383.49 | 1305 / 1809 | 10% | 1.31 | 46 / 472 |
eye | 0% | 0 | 0 / 0 | 46% | 6.77 | 37 / 80 |
lymph node | 0% | 0 | 0 / 0 | 21% | 1.94 | 6 / 29 |
peripheral blood | 4% | 34.18 | 35 / 929 | 0% | 0 | 0 / 0 |
adipose | 1% | 21.59 | 16 / 1204 | 0% | 0 | 0 / 0 |
spleen | 1% | 5.81 | 2 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 2.46 | 1 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 0.68 | 1 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 4.93 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045198 | Biological process | establishment of epithelial cell apical/basal polarity |
GO_0001701 | Biological process | in utero embryonic development |
GO_0030951 | Biological process | establishment or maintenance of microtubule cytoskeleton polarity |
GO_0033043 | Biological process | regulation of organelle organization |
GO_0031175 | Biological process | neuron projection development |
GO_0043111 | Biological process | replication fork arrest |
GO_0009792 | Biological process | embryo development ending in birth or egg hatching |
GO_0034453 | Biological process | microtubule anchoring |
GO_0098840 | Biological process | protein transport along microtubule |
GO_1903358 | Biological process | regulation of Golgi organization |
GO_0030334 | Biological process | regulation of cell migration |
GO_0051893 | Biological process | regulation of focal adhesion assembly |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0003341 | Biological process | cilium movement |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0090136 | Biological process | epithelial cell-cell adhesion |
GO_0031113 | Biological process | regulation of microtubule polymerization |
GO_0000076 | Biological process | DNA replication checkpoint signaling |
GO_0045218 | Biological process | zonula adherens maintenance |
GO_0005915 | Cellular component | zonula adherens |
GO_0005813 | Cellular component | centrosome |
GO_0031514 | Cellular component | motile cilium |
GO_0036449 | Cellular component | microtubule minus-end |
GO_0031298 | Cellular component | replication fork protection complex |
GO_0005930 | Cellular component | axoneme |
GO_0005737 | Cellular component | cytoplasm |
GO_0036064 | Cellular component | ciliary basal body |
GO_0003677 | Molecular function | DNA binding |
GO_0051011 | Molecular function | microtubule minus-end binding |
GO_0030507 | Molecular function | spectrin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CAMSAP3 |
Protein name | Calmodulin-regulated spectrin-associated protein 3 (Protein Nezha) |
Synonyms | KIAA1543 |
Description | FUNCTION: Key microtubule-organizing protein that specifically binds the minus-end of non-centrosomal microtubules and regulates their dynamics and organization . Specifically recognizes growing microtubule minus-ends and autonomously decorates and stabilizes microtubule lattice formed by microtubule minus-end polymerization . Acts on free microtubule minus-ends that are not capped by microtubule-nucleating proteins or other factors and protects microtubule minus-ends from depolymerization . In addition, it also reduces the velocity of microtubule polymerization . Required for the biogenesis and the maintenance of zonula adherens by anchoring the minus-end of microtubules to zonula adherens and by recruiting the kinesin KIFC3 to those junctional sites . Required for orienting the apical-to-basal polarity of microtubules in epithelial cells: acts by tethering non-centrosomal microtubules to the apical cortex, leading to their longitudinal orientation . Plays a key role in early embryos, which lack centrosomes: accumulates at the microtubule bridges that connect pairs of cells and enables the formation of a non-centrosomal microtubule-organizing center that directs intracellular transport in the early embryo (By similarity). Couples non-centrosomal microtubules with actin: interaction with MACF1 at the minus ends of non-centrosomal microtubules, tethers the microtubules to actin filaments, regulating focal adhesion size and cell migration . Plays a key role in the generation of non-centrosomal microtubules by accumulating in the pericentrosomal region and cooperating with KATNA1 to release non-centrosomal microtubules from the centrosome . Through the microtubule cytoskeleton, also regulates the organization of cellular organelles including the Golgi and the early endosomes . Through interaction with AKAP9, involved in translocation of Golgi vesicles in epithelial cells, where microtubules are mainly non-centrosomal . Plays an important role in motile cilia function by facilitatating proper orientation of basal bodies and formation of central microtubule pairs in motile cilia (By similarity). . |
Accessions | Q9P1Y5 ENST00000160298.9 [Q9P1Y5-1] ENST00000446248.4 [Q9P1Y5-2] |