RPL6 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	89% ± 20%	Explore
macrophage	45 studies	74% ± 26%	Explore
natural killer cell	44 studies	87% ± 18%	Explore
endothelial cell	42 studies	72% ± 27%	Explore
fibroblast	42 studies	79% ± 26%	Explore
T cell	40 studies	79% ± 26%	Explore
CD8-positive, alpha-beta T cell	39 studies	86% ± 19%	Explore
pericyte	36 studies	78% ± 27%	Explore
CD4-positive, alpha-beta T cell	36 studies	89% ± 18%	Explore
conventional dendritic cell	32 studies	92% ± 12%	Explore
plasmacytoid dendritic cell	32 studies	90% ± 17%	Explore
dendritic cell	28 studies	83% ± 24%	Explore
plasma cell	27 studies	83% ± 21%	Explore
smooth muscle cell	27 studies	86% ± 22%	Explore
regulatory T cell	27 studies	92% ± 16%	Explore
monocyte	26 studies	77% ± 24%	Explore
endothelial cell of lymphatic vessel	26 studies	80% ± 25%	Explore
classical monocyte	26 studies	87% ± 17%	Explore
mast cell	25 studies	77% ± 22%	Explore
mature NK T cell	25 studies	84% ± 20%	Explore
epithelial cell	25 studies	80% ± 25%	Explore
non-classical monocyte	24 studies	90% ± 16%	Explore
basal cell	22 studies	85% ± 23%	Explore
gamma-delta T cell	21 studies	90% ± 15%	Explore
memory B cell	21 studies	96% ± 8%	Explore
naive B cell	19 studies	92% ± 18%	Explore
connective tissue cell	18 studies	91% ± 13%	Explore
mucosal invariant T cell	17 studies	94% ± 11%	Explore
ciliated cell	16 studies	78% ± 20%	Explore
CD16-negative, CD56-bright natural killer cell, human	16 studies	85% ± 22%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	94% ± 12%	Explore
capillary endothelial cell	16 studies	64% ± 25%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	90% ± 14%	Explore
endothelial cell of artery	15 studies	75% ± 20%	Explore
vein endothelial cell	15 studies	74% ± 25%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	95% ± 13%	Explore
CD8-positive, alpha-beta memory T cell	14 studies	86% ± 21%	Explore
myofibroblast cell	14 studies	89% ± 19%	Explore
myeloid cell	14 studies	82% ± 23%	Explore
innate lymphoid cell	13 studies	91% ± 11%	Explore
endothelial cell of vascular tree	13 studies	79% ± 28%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	86% ± 20%	Explore
plasmablast	12 studies	94% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	89% ± 16%	Explore
secretory cell	12 studies	88% ± 21%	Explore
erythrocyte	12 studies	63% ± 26%	Explore
mesothelial cell	12 studies	83% ± 24%	Explore
astrocyte	11 studies	35% ± 18%	Explore
leukocyte	11 studies	78% ± 27%	Explore
goblet cell	11 studies	72% ± 20%	Explore
type II pneumocyte	10 studies	75% ± 30%	Explore
T follicular helper cell	10 studies	97% ± 3%	Explore
neutrophil	10 studies	70% ± 17%	Explore
progenitor cell	10 studies	91% ± 13%	Explore
IgG plasma cell	10 studies	77% ± 24%	Explore
type I pneumocyte	9 studies	69% ± 23%	Explore
club cell	9 studies	79% ± 28%	Explore
glutamatergic neuron	9 studies	37% ± 20%	Explore
neuron	9 studies	65% ± 26%	Explore
IgA plasma cell	9 studies	74% ± 28%	Explore
microglial cell	9 studies	63% ± 26%	Explore
hematopoietic stem cell	9 studies	91% ± 23%	Explore
platelet	8 studies	53% ± 27%	Explore
abnormal cell	8 studies	81% ± 26%	Explore
oligodendrocyte	8 studies	27% ± 10%	Explore
enterocyte	8 studies	57% ± 24%	Explore
enteroendocrine cell	8 studies	72% ± 32%	Explore
respiratory goblet cell	7 studies	72% ± 26%	Explore
mononuclear phagocyte	7 studies	80% ± 23%	Explore
epithelial cell of proximal tubule	7 studies	82% ± 14%	Explore
transit amplifying cell	7 studies	76% ± 24%	Explore
retinal rod cell	7 studies	51% ± 23%	Explore
alveolar macrophage	6 studies	80% ± 25%	Explore
CD4-positive helper T cell	6 studies	86% ± 18%	Explore
kidney loop of Henle epithelial cell	6 studies	84% ± 12%	Explore
renal alpha-intercalated cell	6 studies	98% ± 2%	Explore
megakaryocyte	6 studies	66% ± 26%	Explore
intestinal crypt stem cell	6 studies	77% ± 29%	Explore
amacrine cell	6 studies	48% ± 20%	Explore
retinal ganglion cell	6 studies	62% ± 25%	Explore
precursor B cell	6 studies	98% ± 3%	Explore
brush cell	6 studies	81% ± 19%	Explore
glial cell	6 studies	60% ± 28%	Explore
immature B cell	6 studies	99% ± 2%	Explore
melanocyte	6 studies	64% ± 29%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	97% ± 4%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	87% ± 24%	Explore
oligodendrocyte precursor cell	6 studies	43% ± 26%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	97% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	93% ± 5%	Explore
hematopoietic precursor cell	5 studies	92% ± 10%	Explore
ionocyte	5 studies	90% ± 4%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	93% ± 7%	Explore
erythroblast	5 studies	84% ± 12%	Explore
OFF-bipolar cell	5 studies	61% ± 26%	Explore
ON-bipolar cell	5 studies	60% ± 25%	Explore
retinal cone cell	5 studies	62% ± 29%	Explore
lymphocyte	5 studies	83% ± 30%	Explore
T-helper 17 cell	5 studies	98% ± 2%	Explore
chondrocyte	5 studies	73% ± 25%	Explore
group 3 innate lymphoid cell	5 studies	96% ± 2%	Explore
Mueller cell	5 studies	58% ± 20%	Explore
double negative thymocyte	5 studies	98% ± 2%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	92% ± 14%	Explore
granulocyte	5 studies	90% ± 9%	Explore
GABAergic neuron	5 studies	45% ± 11%	Explore
intermediate monocyte	5 studies	84% ± 19%	Explore
interneuron	5 studies	57% ± 22%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	81% ± 24%	Explore
duct epithelial cell	4 studies	95% ± 2%	Explore
exhausted T cell	4 studies	94% ± 6%	Explore
precursor cell	4 studies	86% ± 21%	Explore
pancreatic A cell	4 studies	94% ± 8%	Explore
type B pancreatic cell	4 studies	90% ± 13%	Explore
endothelial cell of sinusoid	4 studies	46% ± 29%	Explore
glomerular endothelial cell	4 studies	66% ± 19%	Explore
kidney connecting tubule epithelial cell	4 studies	89% ± 7%	Explore
podocyte	4 studies	83% ± 15%	Explore
GABAergic amacrine cell	4 studies	49% ± 18%	Explore
glycinergic amacrine cell	4 studies	46% ± 18%	Explore
pro-B cell	4 studies	97% ± 2%	Explore
neuroendocrine cell	4 studies	97% ± 2%	Explore
Schwann cell	4 studies	60% ± 31%	Explore
adventitial cell	4 studies	86% ± 14%	Explore
mucus secreting cell	4 studies	79% ± 31%	Explore
adipocyte	4 studies	24% ± 8%	Explore
retina horizontal cell	4 studies	50% ± 17%	Explore
keratinocyte	4 studies	78% ± 31%	Explore
acinar cell	4 studies	83% ± 22%	Explore
muscle cell	4 studies	57% ± 22%	Explore
germinal center B cell	4 studies	97% ± 2%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	96% ± 5%	Explore
hepatocyte	4 studies	61% ± 31%	Explore
IgM plasma cell	4 studies	84% ± 16%	Explore
megakaryocyte-erythroid progenitor cell	4 studies	81% ± 32%	Explore
T-helper 1 cell	4 studies	99% ± 1%	Explore
deuterosomal cell	3 studies	90% ± 1%	Explore
pancreatic D cell	3 studies	96% ± 3%	Explore
renal beta-intercalated cell	3 studies	99% ± 1%	Explore
neural crest cell	3 studies	100% ± 0%	Explore
paneth cell	3 studies	88% ± 8%	Explore
retinal bipolar neuron	3 studies	55% ± 25%	Explore
renal principal cell	3 studies	85% ± 10%	Explore
thymocyte	3 studies	99% ± 2%	Explore
extravillous trophoblast	3 studies	99% ± 0%	Explore
placental villous trophoblast	3 studies	99% ± 0%	Explore
serous secreting cell	3 studies	84% ± 6%	Explore
tissue-resident macrophage	3 studies	68% ± 28%	Explore
follicular B cell	3 studies	97% ± 4%	Explore
intraepithelial lymphocyte	3 studies	97% ± 2%	Explore
rod bipolar cell	3 studies	69% ± 20%	Explore
myoepithelial cell	3 studies	99% ± 1%	Explore
cholangiocyte	3 studies	48% ± 33%	Explore
inflammatory macrophage	3 studies	82% ± 16%	Explore
luminal cell of prostate epithelium	3 studies	99% ± 0%	Explore
retinal pigment epithelial cell	3 studies	49% ± 19%	Explore
pancreatic ductal cell	3 studies	92% ± 4%	Explore
granulocyte monocyte progenitor cell	3 studies	79% ± 27%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	99% ± 1%	Explore
double-positive, alpha-beta thymocyte	3 studies	98% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	99% ± 1%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	78% ± 22%	Explore
peripheral blood	19 studies	90% ± 15%	Explore
intestine	14 studies	76% ± 26%	Explore
brain	14 studies	40% ± 20%	Explore
eye	10 studies	59% ± 21%	Explore
kidney	8 studies	80% ± 19%	Explore
liver	7 studies	65% ± 25%	Explore
bone marrow	6 studies	82% ± 19%	Explore
pancreas	5 studies	84% ± 20%	Explore
uterus	5 studies	92% ± 10%	Explore
lymph node	4 studies	97% ± 2%	Explore
placenta	4 studies	88% ± 17%	Explore
skin	4 studies	75% ± 23%	Explore
esophagus	4 studies	74% ± 22%	Explore
prostate	4 studies	85% ± 25%	Explore
breast	4 studies	95% ± 4%	Explore
heart	3 studies	47% ± 17%	Explore
adipose	3 studies	59% ± 26%	Explore
stomach	3 studies	55% ± 29%	Explore
thymus	3 studies	86% ± 19%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	36354.94	1445 / 1445	100%	384.50	183 / 183
ovary	100%	65703.58	180 / 180	100%	637.65	430 / 430
pancreas	100%	33624.22	328 / 328	100%	396.56	178 / 178
prostate	100%	33622.08	245 / 245	100%	712.52	502 / 502
skin	100%	47902.58	1809 / 1809	100%	479.02	472 / 472
uterus	100%	42647.67	170 / 170	100%	570.96	459 / 459
kidney	100%	27545.34	89 / 89	100%	416.42	900 / 901
thymus	100%	31029.41	653 / 653	100%	576.10	604 / 605
bladder	100%	36724.00	21 / 21	100%	519.27	503 / 504
stomach	100%	29955.92	359 / 359	100%	454.96	285 / 286
breast	100%	39059.94	459 / 459	100%	496.41	1114 / 1118
adrenal gland	100%	31818.00	258 / 258	100%	431.57	229 / 230
lung	99%	26026.52	575 / 578	100%	428.26	1155 / 1155
brain	99%	17185.57	2626 / 2642	100%	378.98	705 / 705
liver	100%	15362.36	225 / 226	100%	344.12	405 / 406
intestine	100%	34526.07	966 / 966	99%	508.67	523 / 527
adipose	100%	37143.75	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	963.34	29 / 29
spleen	100%	31841.69	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	490.51	45 / 45
ureter	0%	0	0 / 0	100%	468.61	1 / 1
blood vessel	100%	31331.71	1334 / 1335	0%	0	0 / 0
muscle	100%	25063.94	802 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	99%	713.71	79 / 80
heart	97%	16651.33	834 / 861	0%	0	0 / 0
peripheral blood	86%	24189.74	799 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0000027	Biological process	ribosomal large subunit assembly
GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0002181	Biological process	cytoplasmic translation
GO_0022626	Cellular component	cytosolic ribosome
GO_0016020	Cellular component	membrane
GO_0036464	Cellular component	cytoplasmic ribonucleoprotein granule
GO_0022625	Cellular component	cytosolic large ribosomal subunit
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0014069	Cellular component	postsynaptic density
GO_0005737	Cellular component	cytoplasm
GO_0005791	Cellular component	rough endoplasmic reticulum
GO_0005634	Cellular component	nucleus
GO_0003677	Molecular function	DNA binding
GO_0045296	Molecular function	cadherin binding
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding

Gene name	RPL6
Protein name	Ribosomal protein L6 60S ribosomal protein L6 Large ribosomal subunit protein eL6 (60S ribosomal protein L6) (Neoplasm-related protein C140) (Tax-responsive enhancer element-binding protein 107) (TaxREB107)
Synonyms	TXREB1
Description	FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . .; FUNCTION: (Microbial infection) Specifically binds to domain C of the Tax-responsive enhancer element in the long terminal repeat of HTLV-I . .
Accessions	Q02878 U3KQR5 F8VU16 ENST00000549847.5 F8VR69 ENST00000202773.14 F8VZA3 ENST00000550566.6 Q8TBK5 F8VWR1 ENST00000551291.6 ENST00000553213.2 F8VZ45 ENST00000548343.1 ENST00000550238.1 Q8N5Z7 ENST00000424576.6

RPL6 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review