Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 10 studies | 36% ± 14% | |
endothelial cell | 5 studies | 26% ± 4% | |
epithelial cell | 5 studies | 26% ± 5% | |
GABAergic neuron | 5 studies | 32% ± 15% | |
astrocyte | 5 studies | 27% ± 10% | |
oligodendrocyte precursor cell | 5 studies | 30% ± 15% | |
glutamatergic neuron | 4 studies | 40% ± 16% | |
microglial cell | 4 studies | 23% ± 6% | |
fibroblast | 4 studies | 20% ± 4% | |
ciliated cell | 4 studies | 21% ± 2% | |
B cell | 3 studies | 19% ± 3% | |
basal cell | 3 studies | 22% ± 6% | |
neuron | 3 studies | 32% ± 13% | |
interneuron | 3 studies | 42% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3666.05 | 459 / 459 | 100% | 16.79 | 1118 / 1118 |
esophagus | 100% | 3174.69 | 1445 / 1445 | 100% | 15.25 | 183 / 183 |
lung | 100% | 3470.56 | 578 / 578 | 100% | 15.35 | 1155 / 1155 |
thymus | 100% | 5156.98 | 653 / 653 | 100% | 20.13 | 605 / 605 |
uterus | 100% | 5334.28 | 170 / 170 | 100% | 16.45 | 459 / 459 |
bladder | 100% | 3687.48 | 21 / 21 | 100% | 14.59 | 503 / 504 |
pancreas | 100% | 1933.09 | 327 / 328 | 100% | 15.41 | 178 / 178 |
prostate | 100% | 4717.40 | 245 / 245 | 100% | 15.57 | 500 / 502 |
ovary | 100% | 5106.84 | 180 / 180 | 100% | 13.11 | 428 / 430 |
stomach | 100% | 2594.36 | 359 / 359 | 99% | 12.21 | 284 / 286 |
kidney | 100% | 3057.34 | 89 / 89 | 99% | 13.82 | 891 / 901 |
brain | 99% | 2064.18 | 2610 / 2642 | 100% | 20.00 | 705 / 705 |
intestine | 100% | 3888.57 | 966 / 966 | 99% | 12.75 | 520 / 527 |
adrenal gland | 100% | 2457.11 | 258 / 258 | 97% | 11.21 | 222 / 230 |
skin | 100% | 3495.57 | 1809 / 1809 | 94% | 12.19 | 443 / 472 |
liver | 92% | 967.11 | 207 / 226 | 74% | 5.35 | 299 / 406 |
adipose | 100% | 3097.03 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.08 | 29 / 29 |
spleen | 100% | 5316.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.70 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.94 | 1 / 1 |
blood vessel | 100% | 3727.67 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2334.76 | 856 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 2049.49 | 795 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 84% | 7.33 | 67 / 80 |
peripheral blood | 70% | 1511.48 | 648 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046872 | Molecular function | metal ion binding |
GO_0003677 | Molecular function | DNA binding |
Gene name | ZBED5 |
Protein name | Zinc finger BED domain-containing protein 5 (Transposon-derived Buster1 transposase-like protein) Zinc finger BED-type containing 5 |
Synonyms | Buster1 |
Description | |
Accessions | E9PJT5 E9PNT1 E9PM71 ENST00000526852.5 ENST00000528289.5 ENST00000413761.7 ENST00000526020.5 ENST00000432999.6 ENST00000534690.5 E9PJ57 Q49AG3 |