SCYL1 | OmnibusX

Name	Number of supported studies	Average coverage
brain	3 studies	24% ± 8%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	5426.23	1445 / 1445	100%	67.70	183 / 183
liver	100%	4563.41	226 / 226	100%	57.82	406 / 406
ovary	100%	6448.55	180 / 180	100%	77.67	430 / 430
pancreas	100%	3712.75	328 / 328	100%	68.40	178 / 178
skin	100%	5507.03	1809 / 1809	100%	98.65	472 / 472
thymus	100%	6585.27	653 / 653	100%	86.91	605 / 605
uterus	100%	6246.53	170 / 170	100%	75.83	459 / 459
prostate	100%	6160.43	245 / 245	100%	106.17	501 / 502
kidney	100%	4640.48	89 / 89	100%	64.01	899 / 901
brain	100%	4410.63	2636 / 2642	100%	70.26	705 / 705
lung	100%	5560.98	578 / 578	100%	74.25	1152 / 1155
adrenal gland	100%	7549.60	258 / 258	100%	72.95	229 / 230
intestine	100%	5315.57	966 / 966	99%	62.70	524 / 527
stomach	100%	4595.03	359 / 359	99%	60.74	284 / 286
breast	100%	5355.89	459 / 459	99%	78.71	1109 / 1118
bladder	100%	5935.81	21 / 21	99%	73.79	497 / 504
adipose	100%	5340.11	1204 / 1204	0%	0	0 / 0
blood vessel	100%	6244.91	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	98.63	80 / 80
lymph node	0%	0	0 / 0	100%	71.54	29 / 29
muscle	100%	7238.23	803 / 803	0%	0	0 / 0
spleen	100%	5702.62	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	65.49	45 / 45
ureter	0%	0	0 / 0	100%	92.20	1 / 1
heart	99%	4020.84	851 / 861	0%	0	0 / 0
peripheral blood	99%	4324.01	918 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0008104	Biological process	protein localization
GO_0006890	Biological process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO_0006954	Biological process	inflammatory response
GO_0021522	Biological process	spinal cord motor neuron differentiation
GO_0048666	Biological process	neuron development
GO_0005813	Cellular component	centrosome
GO_0005801	Cellular component	cis-Golgi network
GO_0030126	Cellular component	COPI vesicle coat
GO_0005829	Cellular component	cytosol
GO_0005794	Cellular component	Golgi apparatus
GO_0016020	Cellular component	membrane
GO_0005793	Cellular component	endoplasmic reticulum-Golgi intermediate compartment
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0045296	Molecular function	cadherin binding
GO_0004713	Molecular function	protein tyrosine kinase activity
GO_0003677	Molecular function	DNA binding
GO_0005524	Molecular function	ATP binding

Gene name	SCYL1
Protein name	N-terminal kinase-like protein (SCY1-like protein 1) N-terminal kinase-like protein (Coated vesicle-associated kinase of 90 kDa) (SCY1-like protein 1) (Telomerase regulation-associated protein) (Telomerase transcriptional element-interacting factor) (Teratoma-associated tyrosine kinase) SCY1 like pseudokinase 1
Synonyms	GKLP TRAP HT019 NTKL TEIF CVAK90 TAPK
Description	FUNCTION: Regulates COPI-mediated retrograde protein traffic at the interface between the Golgi apparatus and the endoplasmic reticulum . Involved in the maintenance of the Golgi apparatus morphology . Has no detectable kinase activity in vitro . .; FUNCTION: Isoform 6 acts as a transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region. .
Accessions	Q96KG9 H0YCI6 E9PPN3 ENST00000528545.1 ENST00000420247.6 [Q96KG9-2] ENST00000524944.5 ENST00000270176.10 [Q96KG9-1] ENST00000527009.5 E9PS17 ENST00000525364.5 E9PK59 ENST00000531601.1 H0YDH0 ENST00000533862.5 [Q96KG9-6]

SCYL1 report