Insufficient scRNA-seq data for expression of TREX2 at single-cell level.
Insufficient scRNA-seq data for expression of TREX2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 94% | 90.28 | 160 / 170 | 71% | 2.41 | 327 / 459 |
ovary | 72% | 47.64 | 130 / 180 | 75% | 1.92 | 322 / 430 |
kidney | 85% | 73.19 | 76 / 89 | 54% | 2.72 | 490 / 901 |
esophagus | 67% | 66.72 | 962 / 1445 | 69% | 2.65 | 127 / 183 |
lung | 85% | 67.88 | 490 / 578 | 46% | 1.02 | 534 / 1155 |
skin | 84% | 676.04 | 1512 / 1809 | 43% | 1.65 | 202 / 472 |
thymus | 94% | 87.22 | 611 / 653 | 23% | 0.73 | 142 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.15 | 1 / 1 |
spleen | 100% | 159.20 | 240 / 241 | 0% | 0 | 0 / 0 |
prostate | 90% | 86.18 | 221 / 245 | 9% | 0.13 | 44 / 502 |
blood vessel | 99% | 321.12 | 1315 / 1335 | 0% | 0 | 0 / 0 |
bladder | 52% | 30.90 | 11 / 21 | 44% | 1.01 | 223 / 504 |
breast | 67% | 41.86 | 309 / 459 | 27% | 0.65 | 301 / 1118 |
intestine | 58% | 36.54 | 556 / 966 | 24% | 0.45 | 126 / 527 |
tonsil | 0% | 0 | 0 / 0 | 76% | 1.79 | 34 / 45 |
eye | 0% | 0 | 0 / 0 | 69% | 1.22 | 55 / 80 |
lymph node | 0% | 0 | 0 / 0 | 66% | 1.31 | 19 / 29 |
adipose | 65% | 41.67 | 782 / 1204 | 0% | 0 | 0 / 0 |
stomach | 34% | 16.27 | 121 / 359 | 27% | 0.49 | 78 / 286 |
pancreas | 24% | 12.02 | 79 / 328 | 36% | 0.55 | 64 / 178 |
adrenal gland | 33% | 15.73 | 84 / 258 | 18% | 0.35 | 42 / 230 |
peripheral blood | 46% | 28.96 | 428 / 929 | 0% | 0 | 0 / 0 |
heart | 32% | 19.14 | 276 / 861 | 0% | 0 | 0 / 0 |
brain | 15% | 6.42 | 387 / 2642 | 9% | 0.15 | 60 / 705 |
liver | 7% | 3.43 | 15 / 226 | 9% | 0.46 | 38 / 406 |
muscle | 3% | 1.80 | 23 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006308 | Biological process | DNA catabolic process |
GO_0006281 | Biological process | DNA repair |
GO_0006259 | Biological process | DNA metabolic process |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008296 | Molecular function | 3'-5'-DNA exonuclease activity |
GO_0003677 | Molecular function | DNA binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0008311 | Molecular function | double-stranded DNA 3'-5' DNA exonuclease activity |
GO_0005515 | Molecular function | protein binding |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | TREX2 |
Protein name | Three prime repair exonuclease 2 (EC 3.1.11.2) (3'-5' exonuclease TREX2) |
Synonyms | |
Description | FUNCTION: Exonuclease with a preference for double-stranded DNA with mismatched 3' termini. May play a role in DNA repair. . |
Accessions | ENST00000338525.7 [Q9BQ50-2] ENST00000393862.7 [Q9BQ50-2] ENST00000370231.3 [Q9BQ50-2] ENST00000370232.4 [Q9BQ50-1] ENST00000330912.7 [Q9BQ50-2] ENST00000370212.5 [Q9BQ50-1] ENST00000334497.7 [Q9BQ50-1] Q9BQ50 |