Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 26% ± 7% | |
fibroblast | 12 studies | 21% ± 6% | |
plasmacytoid dendritic cell | 9 studies | 26% ± 7% | |
capillary endothelial cell | 8 studies | 20% ± 3% | |
B cell | 7 studies | 21% ± 4% | |
endothelial cell of lymphatic vessel | 7 studies | 22% ± 6% | |
pericyte | 7 studies | 21% ± 7% | |
T cell | 5 studies | 25% ± 7% | |
memory B cell | 5 studies | 17% ± 2% | |
epithelial cell | 5 studies | 39% ± 22% | |
smooth muscle cell | 5 studies | 19% ± 2% | |
macrophage | 5 studies | 21% ± 4% | |
dendritic cell | 4 studies | 32% ± 18% | |
monocyte | 4 studies | 17% ± 3% | |
conventional dendritic cell | 4 studies | 23% ± 10% | |
basal cell | 4 studies | 31% ± 9% | |
astrocyte | 4 studies | 24% ± 7% | |
endothelial cell of vascular tree | 4 studies | 26% ± 7% | |
naive B cell | 4 studies | 19% ± 2% | |
oligodendrocyte | 4 studies | 21% ± 6% | |
classical monocyte | 3 studies | 26% ± 7% | |
non-classical monocyte | 3 studies | 27% ± 10% | |
ciliated cell | 3 studies | 39% ± 20% | |
lymphocyte | 3 studies | 25% ± 7% | |
GABAergic neuron | 3 studies | 28% ± 4% | |
glutamatergic neuron | 3 studies | 31% ± 7% | |
microglial cell | 3 studies | 24% ± 4% | |
leukocyte | 3 studies | 16% ± 1% | |
goblet cell | 3 studies | 26% ± 10% | |
connective tissue cell | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4093.74 | 1445 / 1445 | 100% | 23.67 | 183 / 183 |
ovary | 100% | 6204.88 | 180 / 180 | 99% | 14.32 | 426 / 430 |
intestine | 100% | 5745.99 | 966 / 966 | 99% | 10.91 | 522 / 527 |
breast | 100% | 6271.87 | 459 / 459 | 99% | 17.89 | 1104 / 1118 |
skin | 100% | 7956.41 | 1809 / 1809 | 99% | 13.45 | 466 / 472 |
lung | 100% | 5563.81 | 577 / 578 | 99% | 13.06 | 1139 / 1155 |
stomach | 100% | 3493.86 | 359 / 359 | 98% | 12.90 | 281 / 286 |
uterus | 100% | 5678.59 | 170 / 170 | 97% | 11.10 | 444 / 459 |
kidney | 100% | 2939.13 | 89 / 89 | 96% | 14.95 | 869 / 901 |
thymus | 100% | 4097.94 | 652 / 653 | 97% | 11.22 | 584 / 605 |
prostate | 100% | 3758.36 | 245 / 245 | 96% | 11.68 | 483 / 502 |
bladder | 100% | 4433.95 | 21 / 21 | 94% | 8.95 | 475 / 504 |
brain | 92% | 2155.56 | 2440 / 2642 | 99% | 12.92 | 700 / 705 |
adrenal gland | 100% | 2696.10 | 258 / 258 | 89% | 11.20 | 205 / 230 |
pancreas | 85% | 1303.76 | 280 / 328 | 98% | 12.46 | 174 / 178 |
liver | 86% | 1912.52 | 195 / 226 | 55% | 3.36 | 224 / 406 |
adipose | 100% | 6414.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.56 | 29 / 29 |
spleen | 100% | 5272.59 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.77 | 1 / 1 |
blood vessel | 100% | 4488.96 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2271.85 | 792 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 10.70 | 78 / 80 |
heart | 97% | 2377.63 | 832 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.90 | 43 / 45 |
peripheral blood | 63% | 2678.47 | 581 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000118 | Cellular component | histone deacetylase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0003677 | Molecular function | DNA binding |
GO_0003714 | Molecular function | transcription corepressor activity |
Gene name | MIDEAS |
Protein name | Mitotic deacetylase-associated SANT domain protein (ELM2 and SANT domain-containing protein 1) Mitotic deacetylase associated SANT domain protein |
Synonyms | ELMSAN1 C14orf117 C14orf43 |
Description | |
Accessions | C9JYU7 ENST00000421708.1 ENST00000451078.5 Q6PJG2 ENST00000423556.7 A0A1C7CYX1 ENST00000286523.9 ENST00000394071.6 H7C1L3 |