Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 5 studies | 23% ± 3% | |
astrocyte | 4 studies | 34% ± 3% | |
glutamatergic neuron | 4 studies | 46% ± 19% | |
GABAergic neuron | 3 studies | 51% ± 8% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 1% | |
interneuron | 3 studies | 36% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 42% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1735.69 | 180 / 180 | 100% | 10.00 | 428 / 430 |
thymus | 100% | 1593.79 | 653 / 653 | 99% | 10.46 | 600 / 605 |
bladder | 100% | 1370.62 | 21 / 21 | 99% | 7.05 | 499 / 504 |
prostate | 100% | 1396.07 | 245 / 245 | 99% | 6.87 | 496 / 502 |
lung | 99% | 901.89 | 573 / 578 | 99% | 7.20 | 1145 / 1155 |
brain | 98% | 841.69 | 2595 / 2642 | 100% | 12.25 | 704 / 705 |
stomach | 99% | 767.57 | 357 / 359 | 99% | 6.75 | 282 / 286 |
breast | 99% | 978.98 | 456 / 459 | 99% | 7.74 | 1102 / 1118 |
esophagus | 99% | 991.49 | 1436 / 1445 | 98% | 7.70 | 180 / 183 |
intestine | 100% | 1239.11 | 966 / 966 | 98% | 7.11 | 515 / 527 |
uterus | 100% | 1757.82 | 170 / 170 | 97% | 7.37 | 446 / 459 |
pancreas | 99% | 642.50 | 325 / 328 | 98% | 6.78 | 174 / 178 |
kidney | 100% | 903.55 | 89 / 89 | 96% | 7.64 | 861 / 901 |
skin | 100% | 788.86 | 1807 / 1809 | 95% | 6.55 | 449 / 472 |
adrenal gland | 99% | 801.14 | 255 / 258 | 93% | 4.59 | 215 / 230 |
liver | 99% | 592.69 | 223 / 226 | 77% | 3.58 | 311 / 406 |
spleen | 100% | 1180.20 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.73 | 1 / 1 |
blood vessel | 100% | 1027.11 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 921.52 | 1197 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 865.88 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 624.64 | 842 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.96 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 5.73 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 79% | 4.60 | 63 / 80 |
peripheral blood | 57% | 283.89 | 528 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0010792 | Biological process | DNA double-strand break processing involved in repair via single-strand annealing |
GO_0006310 | Biological process | DNA recombination |
GO_0045002 | Biological process | double-strand break repair via single-strand annealing |
GO_0034599 | Biological process | cellular response to oxidative stress |
GO_0006312 | Biological process | mitotic recombination |
GO_0000730 | Biological process | DNA recombinase assembly |
GO_2000819 | Biological process | regulation of nucleotide-excision repair |
GO_0006302 | Biological process | double-strand break repair |
GO_0032993 | Cellular component | protein-DNA complex |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003697 | Molecular function | single-stranded DNA binding |
Gene name | RAD52 |
Protein name | RAD52 homolog (S. cerevisiae), isoform CRA_c (Rhabdomyosarcoma antigen MU-RMS-40.23) (cDNA FLJ77029, highly similar to Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52), transcript variant alpha, mRNA) DNA repair protein RAD52 homolog RAD52 homolog, DNA repair protein RAD52 protein |
Synonyms | hCG_25272 |
Description | FUNCTION: Involved in double-stranded break repair. Plays a central role in genetic recombination and DNA repair by promoting the annealing of complementary single-stranded DNA and by stimulation of the RAD51 recombinase. . |
Accessions | E9PF95 F5GX95 Q1RMF2 ENST00000545564.5 [P43351-2] F5GX32 Q5DR82 ENST00000461568.5 [P43351-3] P43351 ENST00000541619.1 [P43351-4] ENST00000536177.5 ENST00000397230.6 F5H1K5 ENST00000358495.8 [P43351-1] Q3MI84 ENST00000543912.5 ENST00000542785.5 ENST00000544742.5 [P43351-4] ENST00000468231.5 [P43351-3] ENST00000430095.6 [P43351-1] |