Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 18 studies | 42% ± 12% | |
lung | 17 studies | 35% ± 15% | |
intestine | 9 studies | 28% ± 13% | |
kidney | 7 studies | 35% ± 11% | |
brain | 6 studies | 29% ± 8% | |
eye | 6 studies | 28% ± 11% | |
bone marrow | 5 studies | 26% ± 11% | |
lymph node | 5 studies | 35% ± 10% | |
uterus | 4 studies | 40% ± 17% | |
breast | 4 studies | 35% ± 2% | |
liver | 4 studies | 43% ± 21% | |
pancreas | 3 studies | 38% ± 19% | |
prostate | 3 studies | 33% ± 8% | |
placenta | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 3358.79 | 258 / 258 | 100% | 155.97 | 230 / 230 |
esophagus | 100% | 3793.15 | 1445 / 1445 | 100% | 110.33 | 183 / 183 |
ovary | 100% | 2577.14 | 180 / 180 | 100% | 164.49 | 430 / 430 |
thymus | 100% | 5281.91 | 653 / 653 | 100% | 327.45 | 605 / 605 |
uterus | 100% | 3487.47 | 170 / 170 | 100% | 199.87 | 459 / 459 |
brain | 100% | 4526.96 | 2639 / 2642 | 100% | 197.97 | 705 / 705 |
skin | 100% | 6214.63 | 1809 / 1809 | 100% | 180.77 | 471 / 472 |
liver | 100% | 1671.15 | 225 / 226 | 100% | 125.99 | 406 / 406 |
intestine | 100% | 3414.56 | 966 / 966 | 99% | 123.41 | 524 / 527 |
stomach | 100% | 2335.51 | 358 / 359 | 99% | 110.99 | 284 / 286 |
kidney | 100% | 2732.65 | 89 / 89 | 99% | 103.09 | 892 / 901 |
prostate | 100% | 3117.98 | 244 / 245 | 99% | 148.94 | 499 / 502 |
breast | 100% | 3340.64 | 459 / 459 | 98% | 155.63 | 1101 / 1118 |
bladder | 100% | 3473.57 | 21 / 21 | 98% | 171.87 | 496 / 504 |
lung | 100% | 3128.46 | 576 / 578 | 99% | 134.93 | 1139 / 1155 |
pancreas | 97% | 1288.48 | 319 / 328 | 99% | 139.82 | 176 / 178 |
adipose | 100% | 3413.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 105.34 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 236.58 | 29 / 29 |
spleen | 100% | 3466.28 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 196.19 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 319.25 | 1 / 1 |
blood vessel | 100% | 4340.77 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3758.02 | 801 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3581.09 | 918 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 3059.25 | 842 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0017054 | Cellular component | negative cofactor 2 complex |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0017025 | Molecular function | TBP-class protein binding |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
GO_0001091 | Molecular function | RNA polymerase II general transcription initiation factor binding |
GO_0001046 | Molecular function | core promoter sequence-specific DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | DRAP1 |
Protein name | DR1 associated protein 1 Dr1-associated corepressor (Dr1-associated protein 1) (Negative cofactor 2-alpha) (NC2-alpha) |
Synonyms | |
Description | FUNCTION: The association of the DR1/DRAP1 heterodimer with TBP results in a functional repression of both activated and basal transcription of class II genes. This interaction precludes the formation of a transcription-competent complex by inhibiting the association of TFIIA and/or TFIIB with TBP. Can bind to DNA on its own. . |
Accessions | ENST00000376991.6 ENST00000532933.1 E9PMW2 ENST00000525501.5 C9JCC6 E9PQX9 E9PNC7 Q14919 ENST00000527119.5 ENST00000312515.7 [Q14919-1] |