Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 26% ± 5% | |
endothelial cell | 3 studies | 22% ± 3% | |
fibroblast | 3 studies | 21% ± 8% | |
dendritic cell | 3 studies | 24% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1667.89 | 1445 / 1445 | 100% | 39.47 | 183 / 183 |
ovary | 100% | 1516.97 | 180 / 180 | 100% | 36.36 | 430 / 430 |
prostate | 100% | 1324.51 | 245 / 245 | 100% | 34.21 | 502 / 502 |
thymus | 100% | 1244.36 | 653 / 653 | 100% | 42.67 | 605 / 605 |
skin | 100% | 1685.09 | 1809 / 1809 | 100% | 46.16 | 471 / 472 |
uterus | 100% | 1815.27 | 170 / 170 | 100% | 51.97 | 458 / 459 |
kidney | 100% | 1058.30 | 89 / 89 | 100% | 38.10 | 899 / 901 |
brain | 100% | 1095.51 | 2632 / 2642 | 100% | 60.15 | 705 / 705 |
intestine | 100% | 1784.04 | 966 / 966 | 100% | 46.12 | 525 / 527 |
lung | 100% | 1213.00 | 576 / 578 | 100% | 41.47 | 1154 / 1155 |
breast | 100% | 1297.32 | 459 / 459 | 100% | 41.69 | 1113 / 1118 |
bladder | 100% | 1819.38 | 21 / 21 | 99% | 47.68 | 501 / 504 |
pancreas | 99% | 802.08 | 326 / 328 | 100% | 40.98 | 178 / 178 |
stomach | 100% | 1259.46 | 358 / 359 | 100% | 41.25 | 285 / 286 |
liver | 100% | 604.45 | 225 / 226 | 100% | 23.36 | 404 / 406 |
adrenal gland | 100% | 1052.59 | 258 / 258 | 99% | 42.64 | 227 / 230 |
adipose | 100% | 1258.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 37.16 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 63.65 | 29 / 29 |
muscle | 100% | 1860.59 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1865.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 48.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.98 | 1 / 1 |
blood vessel | 100% | 1627.05 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1116.32 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1005.33 | 915 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030182 | Biological process | neuron differentiation |
GO_0022900 | Biological process | electron transport chain |
GO_0008283 | Biological process | cell population proliferation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0043524 | Biological process | negative regulation of neuron apoptotic process |
GO_1903108 | Biological process | regulation of mitochondrial transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000785 | Cellular component | chromatin |
GO_0003677 | Molecular function | DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | THAP11 |
Protein name | THAP domain-containing protein 11 THAP domain containing 11 |
Synonyms | HRIHFB2206 |
Description | FUNCTION: Transcriptional repressor that plays a central role for embryogenesis and the pluripotency of embryonic stem (ES) cells. Sequence-specific DNA-binding factor that represses gene expression in pluripotent ES cells by directly binding to key genetic loci and recruiting epigenetic modifiers (By similarity). . |
Accessions | B5APZ3 Q96EK4 ENST00000303596.3 |