Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 34% ± 19% | |
microglial cell | 6 studies | 29% ± 5% | |
mast cell | 6 studies | 24% ± 6% | |
interneuron | 5 studies | 29% ± 9% | |
neuron | 5 studies | 40% ± 19% | |
pericyte | 5 studies | 27% ± 16% | |
fibroblast | 5 studies | 23% ± 11% | |
GABAergic neuron | 5 studies | 42% ± 12% | |
glutamatergic neuron | 4 studies | 43% ± 11% | |
macrophage | 3 studies | 40% ± 4% | |
retina horizontal cell | 3 studies | 22% ± 6% | |
hepatocyte | 3 studies | 28% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3604.27 | 180 / 180 | 99% | 20.07 | 427 / 430 |
breast | 100% | 1827.91 | 458 / 459 | 98% | 13.70 | 1093 / 1118 |
kidney | 100% | 2670.54 | 89 / 89 | 97% | 13.26 | 878 / 901 |
thymus | 100% | 2652.39 | 653 / 653 | 96% | 10.35 | 579 / 605 |
prostate | 100% | 1474.85 | 245 / 245 | 95% | 9.42 | 476 / 502 |
pancreas | 100% | 1398.20 | 328 / 328 | 94% | 7.96 | 167 / 178 |
skin | 97% | 1567.44 | 1747 / 1809 | 94% | 14.75 | 443 / 472 |
lung | 99% | 1363.08 | 573 / 578 | 91% | 9.26 | 1048 / 1155 |
adrenal gland | 100% | 2010.86 | 257 / 258 | 87% | 7.89 | 200 / 230 |
esophagus | 91% | 670.23 | 1318 / 1445 | 90% | 11.43 | 164 / 183 |
uterus | 100% | 3024.06 | 170 / 170 | 80% | 9.32 | 369 / 459 |
stomach | 99% | 1262.66 | 357 / 359 | 73% | 7.80 | 209 / 286 |
bladder | 100% | 952.05 | 21 / 21 | 65% | 5.31 | 326 / 504 |
liver | 100% | 1239.59 | 226 / 226 | 60% | 4.83 | 243 / 406 |
intestine | 98% | 803.69 | 943 / 966 | 61% | 5.33 | 319 / 527 |
brain | 90% | 798.72 | 2367 / 2642 | 53% | 3.15 | 375 / 705 |
eye | 0% | 0 | 0 / 0 | 100% | 15.91 | 80 / 80 |
spleen | 100% | 1348.36 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2577.92 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1493.86 | 1200 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 9.24 | 40 / 45 |
heart | 78% | 465.27 | 671 / 861 | 0% | 0 | 0 / 0 |
muscle | 60% | 304.21 | 478 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.35 | 3 / 29 |
peripheral blood | 1% | 2.91 | 8 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0035563 | Biological process | positive regulation of chromatin binding |
GO_0005721 | Cellular component | pericentric heterochromatin |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0001221 | Molecular function | transcription coregulator binding |
GO_0003677 | Molecular function | DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF618 |
Protein name | Zinc finger protein 618 |
Synonyms | KIAA1952 |
Description | FUNCTION: Regulates UHRF2 function as a specific 5-hydroxymethylcytosine (5hmC) reader by regulating its chromatin localization. . |
Accessions | ENST00000452710.5 ENST00000374124.4 ENST00000615615.4 [Q5T7W0-4] B1ALC2 B5MDS3 ENST00000374126.10 [Q5T7W0-1] Q5T7W0 ENST00000288466.11 [Q5T7W0-2] |