Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 3 studies | 24% ± 6% | |
platelet | 3 studies | 20% ± 5% |
Insufficient scRNA-seq data for expression of CENPT at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3768.54 | 1445 / 1445 | 100% | 11.86 | 183 / 183 |
skin | 100% | 5456.71 | 1809 / 1809 | 100% | 13.73 | 472 / 472 |
uterus | 100% | 5221.32 | 170 / 170 | 100% | 22.13 | 459 / 459 |
adrenal gland | 100% | 3330.36 | 258 / 258 | 100% | 16.51 | 229 / 230 |
ovary | 100% | 4964.92 | 180 / 180 | 100% | 12.19 | 428 / 430 |
intestine | 100% | 4371.13 | 966 / 966 | 99% | 12.32 | 524 / 527 |
bladder | 100% | 4178.10 | 21 / 21 | 99% | 18.45 | 501 / 504 |
prostate | 100% | 5472.68 | 245 / 245 | 99% | 13.60 | 499 / 502 |
stomach | 100% | 3184.23 | 359 / 359 | 99% | 10.52 | 284 / 286 |
pancreas | 100% | 3010.36 | 328 / 328 | 99% | 15.17 | 176 / 178 |
lung | 100% | 3806.99 | 578 / 578 | 99% | 11.90 | 1141 / 1155 |
kidney | 100% | 3530.03 | 89 / 89 | 98% | 12.77 | 886 / 901 |
thymus | 100% | 4390.35 | 653 / 653 | 98% | 11.46 | 594 / 605 |
brain | 98% | 3786.65 | 2590 / 2642 | 100% | 22.94 | 705 / 705 |
liver | 100% | 2057.12 | 226 / 226 | 98% | 8.98 | 397 / 406 |
breast | 100% | 4220.98 | 459 / 459 | 97% | 9.93 | 1090 / 1118 |
adipose | 100% | 3830.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.46 | 29 / 29 |
spleen | 100% | 5654.84 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 22.38 | 1 / 1 |
blood vessel | 100% | 3604.52 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2011.67 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 10.88 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 13.90 | 44 / 45 |
muscle | 96% | 1459.09 | 772 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 1654.16 | 826 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051301 | Biological process | cell division |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0051276 | Biological process | chromosome organization |
GO_0007059 | Biological process | chromosome segregation |
GO_0051382 | Biological process | kinetochore assembly |
GO_0000775 | Cellular component | chromosome, centromeric region |
GO_0000776 | Cellular component | kinetochore |
GO_0005634 | Cellular component | nucleus |
GO_0005829 | Cellular component | cytosol |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016604 | Cellular component | nuclear body |
GO_0000939 | Cellular component | inner kinetochore |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CENPT |
Protein name | Centromere protein T (CENP-T) (Interphase centromere complex protein 22) Centromere protein T |
Synonyms | C16orf56 ICEN22 |
Description | FUNCTION: Component of the CENPA-NAC (nucleosome-associated) complex, a complex that plays a central role in assembly of kinetochore proteins, mitotic progression and chromosome segregation. The CENPA-NAC complex recruits the CENPA-CAD (nucleosome distal) complex and may be involved in incorporation of newly synthesized CENPA into centromeres. Part of a nucleosome-associated complex that binds specifically to histone H3-containing nucleosomes at the centromere, as opposed to nucleosomes containing CENPA. Component of the heterotetrameric CENP-T-W-S-X complex that binds and supercoils DNA, and plays an important role in kinetochore assembly. CENPT has a fundamental role in kinetochore assembly and function. It is one of the inner kinetochore proteins, with most further proteins binding downstream. Required for normal chromosome organization and normal progress through mitosis. . |
Accessions | ENST00000561593.5 ENST00000566067.5 ENST00000626059.2 H3BMP6 ENST00000440851.6 [Q96BT3-1] ENST00000562462.5 H3BQ71 H3BQJ0 I3L4F8 ENST00000562338.1 Q96BT3 ENST00000562513.6 ENST00000564817.5 ENST00000566758.5 ENST00000562787.6 [Q96BT3-1] H3BUW2 H3BTS2 H3BTR4 ENST00000565114.5 ENST00000568069.5 H3BQS6 H3BN05 ENST00000565713.5 |