Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 13 studies | 25% ± 9% | |
plasmacytoid dendritic cell | 12 studies | 29% ± 12% | |
microglial cell | 9 studies | 26% ± 8% | |
myeloid cell | 8 studies | 23% ± 6% | |
epithelial cell | 5 studies | 57% ± 17% | |
endothelial cell | 5 studies | 25% ± 6% | |
plasma cell | 5 studies | 30% ± 12% | |
classical monocyte | 4 studies | 33% ± 11% | |
enteroendocrine cell | 4 studies | 29% ± 14% | |
dendritic cell | 4 studies | 25% ± 14% | |
hematopoietic precursor cell | 3 studies | 24% ± 6% | |
leukocyte | 3 studies | 24% ± 4% | |
extravillous trophoblast | 3 studies | 85% ± 4% | |
placental villous trophoblast | 3 studies | 55% ± 9% | |
glutamatergic neuron | 3 studies | 28% ± 5% | |
pericyte | 3 studies | 17% ± 1% | |
neuron | 3 studies | 33% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 1168.36 | 1809 / 1809 | 98% | 7.94 | 464 / 472 |
intestine | 100% | 775.01 | 966 / 966 | 98% | 21.49 | 517 / 527 |
lung | 100% | 1359.40 | 577 / 578 | 97% | 10.63 | 1120 / 1155 |
esophagus | 100% | 621.35 | 1443 / 1445 | 97% | 14.14 | 177 / 183 |
stomach | 98% | 435.35 | 351 / 359 | 98% | 24.63 | 281 / 286 |
breast | 98% | 687.83 | 452 / 459 | 96% | 6.18 | 1072 / 1118 |
prostate | 99% | 600.84 | 243 / 245 | 95% | 4.76 | 475 / 502 |
pancreas | 98% | 523.38 | 323 / 328 | 94% | 6.91 | 167 / 178 |
thymus | 99% | 539.73 | 647 / 653 | 92% | 4.51 | 557 / 605 |
bladder | 100% | 646.29 | 21 / 21 | 89% | 13.28 | 447 / 504 |
adrenal gland | 100% | 512.80 | 257 / 258 | 86% | 4.71 | 198 / 230 |
uterus | 99% | 654.62 | 169 / 170 | 86% | 7.88 | 396 / 459 |
kidney | 100% | 967.80 | 89 / 89 | 81% | 3.78 | 726 / 901 |
brain | 77% | 372.52 | 2045 / 2642 | 90% | 3.90 | 631 / 705 |
ovary | 80% | 316.27 | 144 / 180 | 75% | 5.40 | 323 / 430 |
liver | 79% | 296.87 | 179 / 226 | 61% | 7.77 | 248 / 406 |
spleen | 100% | 1906.08 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.76 | 1 / 1 |
adipose | 100% | 993.27 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 4597.49 | 928 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 7.38 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 93% | 18.56 | 27 / 29 |
heart | 86% | 309.50 | 739 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 81% | 333.19 | 1087 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 74% | 3.01 | 59 / 80 |
muscle | 58% | 193.38 | 463 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0045121 | Cellular component | membrane raft |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003712 | Molecular function | transcription coregulator activity |
GO_0003682 | Molecular function | chromatin binding |
Gene name | ARID3A |
Protein name | AT-rich interactive domain-containing protein 3A (ARID domain-containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (Dead ringer-like protein 1) (E2F-binding protein 1) AT-rich interactive domain-containing protein 3 (ARID domain-containing protein) |
Synonyms | DRIL1 DRIL3 E2FBP1 DRX |
Description | FUNCTION: Transcription factor which may be involved in the control of cell cycle progression by the RB1/E2F1 pathway and in B-cell differentiation. . FUNCTION: Transcription factor. . FUNCTION: Transcription factor. . |
Accessions | ENST00000587532.5 K7EJ04 ENST00000263620.8 H0YFY1 Q99856 ENST00000457152.3 |