Insufficient scRNA-seq data for expression of SIM2 at single-cell level.
Insufficient scRNA-seq data for expression of SIM2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 1283.41 | 243 / 245 | 98% | 22.78 | 491 / 502 |
stomach | 99% | 1431.62 | 355 / 359 | 85% | 8.09 | 243 / 286 |
esophagus | 99% | 2048.73 | 1428 / 1445 | 74% | 9.86 | 135 / 183 |
intestine | 80% | 96.10 | 775 / 966 | 77% | 5.81 | 407 / 527 |
bladder | 86% | 128.43 | 18 / 21 | 63% | 3.45 | 319 / 504 |
uterus | 90% | 119.44 | 153 / 170 | 48% | 3.13 | 221 / 459 |
brain | 99% | 371.65 | 2623 / 2642 | 36% | 1.97 | 257 / 705 |
breast | 72% | 90.33 | 332 / 459 | 35% | 2.30 | 392 / 1118 |
kidney | 100% | 3128.27 | 89 / 89 | 6% | 0.30 | 52 / 901 |
muscle | 95% | 424.95 | 760 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 91% | 120.18 | 1219 / 1335 | 0% | 0 | 0 / 0 |
lung | 49% | 45.02 | 283 / 578 | 39% | 2.37 | 451 / 1155 |
thymus | 87% | 107.28 | 566 / 653 | 1% | 0.06 | 4 / 605 |
adrenal gland | 81% | 77.86 | 208 / 258 | 5% | 0.27 | 11 / 230 |
pancreas | 25% | 19.55 | 83 / 328 | 46% | 2.24 | 82 / 178 |
ovary | 53% | 46.84 | 96 / 180 | 17% | 1.93 | 75 / 430 |
tonsil | 0% | 0 | 0 / 0 | 64% | 13.46 | 29 / 45 |
spleen | 63% | 53.44 | 151 / 241 | 0% | 0 | 0 / 0 |
skin | 44% | 53.91 | 789 / 1809 | 17% | 0.85 | 81 / 472 |
adipose | 49% | 44.78 | 584 / 1204 | 0% | 0 | 0 / 0 |
liver | 42% | 33.80 | 95 / 226 | 5% | 0.19 | 21 / 406 |
heart | 11% | 7.73 | 95 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009880 | Biological process | embryonic pattern specification |
GO_0030324 | Biological process | lung development |
GO_0007399 | Biological process | nervous system development |
GO_0030154 | Biological process | cell differentiation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
Gene name | SIM2 |
Protein name | Single-minded homolog 2 (Class E basic helix-loop-helix protein 15) (bHLHe15) SIM bHLH transcription factor 2 |
Synonyms | BHLHE15 |
Description | FUNCTION: Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development. |
Accessions | ENST00000431229.1 V9GY04 H7BZX8 ENST00000483178.2 ENST00000290399.11 [Q14190-1] Q14190 |