Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 29% ± 12% | |
oligodendrocyte | 13 studies | 46% ± 18% | |
oligodendrocyte precursor cell | 10 studies | 42% ± 19% | |
astrocyte | 10 studies | 38% ± 16% | |
microglial cell | 9 studies | 32% ± 10% | |
adipocyte | 9 studies | 31% ± 8% | |
fibroblast | 9 studies | 30% ± 9% | |
glutamatergic neuron | 8 studies | 48% ± 25% | |
epithelial cell | 8 studies | 31% ± 16% | |
GABAergic neuron | 7 studies | 49% ± 21% | |
macrophage | 7 studies | 36% ± 11% | |
smooth muscle cell | 7 studies | 23% ± 5% | |
neuron | 6 studies | 39% ± 22% | |
dendritic cell | 6 studies | 17% ± 2% | |
endothelial cell of lymphatic vessel | 6 studies | 33% ± 10% | |
pericyte | 6 studies | 25% ± 8% | |
interneuron | 5 studies | 49% ± 24% | |
mast cell | 5 studies | 22% ± 5% | |
ciliated cell | 5 studies | 21% ± 8% | |
cardiac muscle cell | 4 studies | 29% ± 1% | |
amacrine cell | 4 studies | 25% ± 6% | |
retina horizontal cell | 4 studies | 23% ± 7% | |
retinal rod cell | 4 studies | 22% ± 4% | |
T cell | 4 studies | 22% ± 5% | |
type I pneumocyte | 4 studies | 26% ± 9% | |
type II pneumocyte | 4 studies | 27% ± 9% | |
basal cell | 4 studies | 37% ± 21% | |
glial cell | 3 studies | 20% ± 4% | |
granule cell | 3 studies | 25% ± 5% | |
plasma cell | 3 studies | 22% ± 4% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 2% | |
vein endothelial cell | 3 studies | 29% ± 17% | |
Mueller cell | 3 studies | 29% ± 7% | |
glycinergic amacrine cell | 3 studies | 23% ± 5% | |
myeloid cell | 3 studies | 24% ± 6% | |
endothelial cell of vascular tree | 3 studies | 28% ± 15% | |
connective tissue cell | 3 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 27% ± 8% | |
club cell | 3 studies | 34% ± 10% | |
monocyte | 3 studies | 24% ± 3% | |
lymphocyte | 3 studies | 29% ± 7% | |
goblet cell | 3 studies | 37% ± 25% | |
transit amplifying cell | 3 studies | 39% ± 28% | |
plasmacytoid dendritic cell | 3 studies | 17% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2046.87 | 1445 / 1445 | 100% | 18.12 | 183 / 183 |
ovary | 100% | 2594.07 | 180 / 180 | 100% | 14.48 | 430 / 430 |
prostate | 100% | 2312.20 | 245 / 245 | 100% | 17.93 | 502 / 502 |
breast | 100% | 2757.97 | 459 / 459 | 100% | 22.66 | 1117 / 1118 |
intestine | 100% | 2243.58 | 966 / 966 | 100% | 13.69 | 526 / 527 |
thymus | 100% | 2771.05 | 653 / 653 | 100% | 18.89 | 603 / 605 |
bladder | 100% | 2610.57 | 21 / 21 | 100% | 13.95 | 502 / 504 |
brain | 100% | 1497.39 | 2639 / 2642 | 100% | 15.25 | 703 / 705 |
lung | 99% | 1803.24 | 575 / 578 | 100% | 15.26 | 1155 / 1155 |
uterus | 100% | 2746.54 | 170 / 170 | 99% | 16.15 | 456 / 459 |
stomach | 100% | 1641.18 | 359 / 359 | 99% | 14.28 | 283 / 286 |
pancreas | 100% | 1343.38 | 328 / 328 | 99% | 12.39 | 176 / 178 |
kidney | 100% | 1749.30 | 89 / 89 | 99% | 13.60 | 890 / 901 |
skin | 100% | 3190.63 | 1809 / 1809 | 97% | 20.03 | 457 / 472 |
liver | 100% | 1416.81 | 226 / 226 | 97% | 8.77 | 393 / 406 |
adrenal gland | 100% | 2448.95 | 258 / 258 | 96% | 8.16 | 221 / 230 |
adipose | 100% | 2344.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2243.19 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.00 | 29 / 29 |
spleen | 100% | 1766.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.33 | 1 / 1 |
muscle | 100% | 1628.87 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1195.92 | 828 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 13.81 | 75 / 80 |
peripheral blood | 40% | 747.28 | 367 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_0090043 | Biological process | regulation of tubulin deacetylation |
GO_0045995 | Biological process | regulation of embryonic development |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0051302 | Biological process | regulation of cell division |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0072686 | Cellular component | mitotic spindle |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0140672 | Cellular component | ATAC complex |
GO_0035064 | Molecular function | methylated histone binding |
GO_0003677 | Molecular function | DNA binding |
GO_0070577 | Molecular function | lysine-acetylated histone binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0140566 | Molecular function | histone reader activity |
Gene name | ZZZ3 |
Protein name | Zinc finger ZZ-type containing 3 ZZ-type zinc finger-containing protein 3 |
Synonyms | |
Description | FUNCTION: Histone H3 reader that is required for the ATAC complex-mediated maintenance of histone acetylation and gene activation . Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4 . . |
Accessions | Q8IYH5 C9JUA4 ENST00000370798.5 [Q8IYH5-3] ENST00000370801.8 [Q8IYH5-1] ENST00000414381.5 ENST00000433749.5 C9J283 |