Insufficient scRNA-seq data for expression of H2BC13 at single-cell level.
Insufficient scRNA-seq data for expression of H2BC13 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 79% | 3.44 | 142 / 180 | 73% | 2.72 | 315 / 430 |
prostate | 79% | 4.18 | 194 / 245 | 61% | 1.83 | 305 / 502 |
esophagus | 65% | 2.53 | 937 / 1445 | 70% | 1.92 | 128 / 183 |
skin | 71% | 3.71 | 1285 / 1809 | 52% | 1.37 | 245 / 472 |
uterus | 64% | 2.12 | 108 / 170 | 59% | 2.46 | 272 / 459 |
intestine | 67% | 3.38 | 644 / 966 | 52% | 3.92 | 272 / 527 |
lung | 73% | 3.44 | 424 / 578 | 42% | 2.16 | 490 / 1155 |
stomach | 53% | 1.81 | 192 / 359 | 57% | 3.61 | 164 / 286 |
bladder | 62% | 2.10 | 13 / 21 | 43% | 7.51 | 216 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.23 | 1 / 1 |
breast | 47% | 1.55 | 217 / 459 | 41% | 2.56 | 457 / 1118 |
peripheral blood | 87% | 9.61 | 808 / 929 | 0% | 0 | 0 / 0 |
spleen | 76% | 6.15 | 183 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 55% | 1.60 | 141 / 258 | 21% | 0.39 | 48 / 230 |
blood vessel | 70% | 2.59 | 929 / 1335 | 0% | 0 | 0 / 0 |
thymus | 52% | 1.75 | 339 / 653 | 11% | 0.29 | 65 / 605 |
lymph node | 0% | 0 | 0 / 0 | 62% | 1.33 | 18 / 29 |
kidney | 38% | 1.39 | 34 / 89 | 21% | 0.51 | 189 / 901 |
brain | 47% | 1.94 | 1230 / 2642 | 12% | 0.33 | 86 / 705 |
liver | 39% | 1.22 | 89 / 226 | 12% | 0.24 | 50 / 406 |
tonsil | 0% | 0 | 0 / 0 | 44% | 0.84 | 20 / 45 |
adipose | 42% | 1.40 | 509 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 23% | 0.44 | 74 / 328 | 17% | 0.50 | 30 / 178 |
eye | 0% | 0 | 0 / 0 | 39% | 1.08 | 31 / 80 |
heart | 38% | 0.94 | 327 / 861 | 0% | 0 | 0 / 0 |
muscle | 28% | 0.58 | 226 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006334 | Biological process | nucleosome assembly |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000786 | Cellular component | nucleosome |
GO_0005634 | Cellular component | nucleus |
GO_0030527 | Molecular function | structural constituent of chromatin |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | H2BC13 |
Protein name | Histone H2B type 1-L (Histone H2B.c) (H2B/c) |
Synonyms | HIST1H2BL H2BFC |
Description | FUNCTION: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. |
Accessions | ENST00000377401.4 Q99880 |