Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| classical monocyte | 3 studies | 22% ± 2% | |
| epithelial cell | 3 studies | 32% ± 6% |
Insufficient scRNA-seq data for expression of MBD6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 6333.41 | 1445 / 1445 | 100% | 55.24 | 183 / 183 |
| ovary | 100% | 8495.59 | 180 / 180 | 100% | 56.13 | 429 / 430 |
| skin | 100% | 5824.44 | 1809 / 1809 | 100% | 38.98 | 470 / 472 |
| intestine | 100% | 7554.71 | 966 / 966 | 99% | 35.47 | 522 / 527 |
| stomach | 100% | 6451.85 | 359 / 359 | 99% | 38.39 | 282 / 286 |
| pancreas | 100% | 4787.37 | 327 / 328 | 99% | 36.08 | 176 / 178 |
| thymus | 100% | 24128.03 | 653 / 653 | 99% | 44.89 | 596 / 605 |
| lung | 100% | 7037.05 | 578 / 578 | 98% | 38.40 | 1131 / 1155 |
| breast | 100% | 7687.65 | 459 / 459 | 98% | 37.69 | 1092 / 1118 |
| prostate | 100% | 8389.15 | 245 / 245 | 97% | 39.79 | 488 / 502 |
| uterus | 100% | 10373.74 | 170 / 170 | 96% | 35.58 | 442 / 459 |
| bladder | 100% | 6967.05 | 21 / 21 | 96% | 33.12 | 485 / 504 |
| kidney | 100% | 7618.46 | 89 / 89 | 96% | 26.88 | 867 / 901 |
| adrenal gland | 100% | 7702.07 | 258 / 258 | 95% | 30.40 | 218 / 230 |
| liver | 100% | 4616.10 | 225 / 226 | 86% | 20.49 | 350 / 406 |
| brain | 82% | 2420.92 | 2177 / 2642 | 98% | 31.25 | 691 / 705 |
| adipose | 100% | 6394.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 13396.80 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 24.62 | 1 / 1 |
| blood vessel | 100% | 5801.30 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 99% | 10623.24 | 923 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 30.16 | 79 / 80 |
| muscle | 98% | 3613.08 | 789 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 34.99 | 44 / 45 |
| heart | 97% | 2914.40 | 837 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 69% | 19.06 | 20 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0005694 | Cellular component | chromosome |
| GO_0010369 | Cellular component | chromocenter |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0001650 | Cellular component | fibrillar center |
| GO_0005634 | Cellular component | nucleus |
| GO_0003677 | Molecular function | DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003682 | Molecular function | chromatin binding |
| Gene name | MBD6 |
| Protein name | Methyl-CpG binding domain protein 6 Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6) |
| Synonyms | KIAA1887 |
| Description | FUNCTION: Binds to heterochromatin. Does not interact with either methylated or unmethylated DNA (in vitro). |
| Accessions | F8VNX1 ENST00000547545.1 ENST00000552163.1 A0A0C4DGJ6 H0YHD1 F8VW40 Q6P0P0 Q96DN6 F8VU14 ENST00000551351.5 F8VPC4 ENST00000546805.5 ENST00000549042.1 ENST00000549623.1 ENST00000548887.5 ENST00000552659.1 ENST00000552255.5 H0YIU1 F8VVK7 ENST00000547844.1 ENST00000355673.8 ENST00000546632.1 H0YHN1 F8VZD7 |