Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 5 studies | 22% ± 6% | |
| GABAergic neuron | 4 studies | 34% ± 12% | |
| astrocyte | 4 studies | 25% ± 8% | |
| interneuron | 4 studies | 35% ± 18% | |
| epithelial cell | 3 studies | 22% ± 3% | |
| glutamatergic neuron | 3 studies | 51% ± 13% | |
| oligodendrocyte precursor cell | 3 studies | 32% ± 11% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 40% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 2912.80 | 2642 / 2642 | 100% | 25.36 | 704 / 705 |
| breast | 100% | 2435.65 | 459 / 459 | 100% | 16.10 | 1114 / 1118 |
| prostate | 100% | 3523.87 | 245 / 245 | 100% | 13.11 | 500 / 502 |
| thymus | 100% | 3843.36 | 653 / 653 | 100% | 13.95 | 602 / 605 |
| uterus | 100% | 3586.50 | 170 / 170 | 98% | 11.32 | 452 / 459 |
| adrenal gland | 100% | 2134.86 | 258 / 258 | 98% | 11.21 | 226 / 230 |
| kidney | 100% | 2426.03 | 89 / 89 | 98% | 12.58 | 882 / 901 |
| pancreas | 99% | 1524.67 | 326 / 328 | 98% | 8.84 | 174 / 178 |
| lung | 99% | 1928.31 | 575 / 578 | 97% | 9.66 | 1123 / 1155 |
| bladder | 100% | 2766.19 | 21 / 21 | 96% | 9.87 | 484 / 504 |
| esophagus | 100% | 2169.24 | 1441 / 1445 | 96% | 9.56 | 176 / 183 |
| stomach | 100% | 1895.85 | 359 / 359 | 92% | 7.52 | 262 / 286 |
| intestine | 100% | 2684.29 | 966 / 966 | 91% | 7.43 | 481 / 527 |
| ovary | 100% | 3652.88 | 180 / 180 | 91% | 8.23 | 391 / 430 |
| skin | 100% | 1959.16 | 1809 / 1809 | 86% | 8.11 | 406 / 472 |
| liver | 98% | 1202.15 | 222 / 226 | 65% | 4.22 | 265 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 7.39 | 29 / 29 |
| spleen | 100% | 2721.54 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 5.50 | 1 / 1 |
| blood vessel | 100% | 1871.70 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 100% | 2020.34 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 99% | 1204.44 | 795 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 1348.81 | 849 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 93% | 8.69 | 42 / 45 |
| eye | 0% | 0 | 0 / 0 | 61% | 4.36 | 49 / 80 |
| peripheral blood | 30% | 609.18 | 278 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0003677 | Molecular function | DNA binding |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0008270 | Molecular function | zinc ion binding |
| Gene name | ZNF84 |
| Protein name | Zinc finger protein 84 Zinc finger protein 84 (Zinc finger protein HPF2) Alternative protein ZNF84 |
| Synonyms | |
| Description | FUNCTION: May be involved in transcriptional regulation. |
| Accessions | ENST00000539354.6 ENST00000542874.5 F5H630 J3KQ53 F5H6X5 L8E909 F5H3F5 ENST00000438628.6 F5H1B1 ENST00000536123.5 ENST00000543310.5 P51523 ENST00000392319.6 ENST00000535439.2 ENST00000543758.5 F5H0T0 ENST00000327668.11 F5H1R3 ENST00000540031.5 |
