Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 26% ± 6% | |
oligodendrocyte precursor cell | 11 studies | 39% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5925.80 | 2631 / 2642 | 99% | 529.53 | 701 / 705 |
skin | 44% | 566.67 | 801 / 1809 | 71% | 29.24 | 335 / 472 |
eye | 0% | 0 | 0 / 0 | 95% | 33.45 | 76 / 80 |
intestine | 31% | 278.05 | 302 / 966 | 20% | 2.42 | 107 / 527 |
pancreas | 2% | 13.72 | 6 / 328 | 34% | 3.94 | 61 / 178 |
breast | 21% | 193.92 | 95 / 459 | 11% | 4.58 | 128 / 1118 |
prostate | 11% | 89.26 | 27 / 245 | 19% | 1.22 | 96 / 502 |
blood vessel | 30% | 350.48 | 401 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 16% | 140.70 | 227 / 1445 | 11% | 1.57 | 21 / 183 |
heart | 24% | 238.17 | 205 / 861 | 0% | 0 | 0 / 0 |
stomach | 4% | 34.81 | 15 / 359 | 16% | 3.78 | 46 / 286 |
bladder | 14% | 104.86 | 3 / 21 | 6% | 0.63 | 30 / 504 |
lymph node | 0% | 0 | 0 / 0 | 17% | 1.97 | 5 / 29 |
thymus | 1% | 9.75 | 9 / 653 | 15% | 1.30 | 93 / 605 |
adrenal gland | 1% | 4.92 | 2 / 258 | 15% | 1.90 | 34 / 230 |
kidney | 1% | 6.06 | 1 / 89 | 14% | 1.80 | 128 / 901 |
tonsil | 0% | 0 | 0 / 0 | 13% | 5.19 | 6 / 45 |
uterus | 2% | 16.14 | 4 / 170 | 8% | 2.52 | 35 / 459 |
lung | 0% | 3.80 | 2 / 578 | 7% | 0.72 | 79 / 1155 |
adipose | 6% | 63.91 | 77 / 1204 | 0% | 0 | 0 / 0 |
spleen | 3% | 24.19 | 8 / 241 | 0% | 0 | 0 / 0 |
liver | 0% | 7.72 | 1 / 226 | 2% | 0.29 | 8 / 406 |
muscle | 1% | 11.04 | 11 / 803 | 0% | 0 | 0 / 0 |
ovary | 1% | 3.29 | 1 / 180 | 1% | 0.05 | 3 / 430 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048484 | Biological process | enteric nervous system development |
GO_0007283 | Biological process | spermatogenesis |
GO_0002009 | Biological process | morphogenesis of an epithelium |
GO_0033690 | Biological process | positive regulation of osteoblast proliferation |
GO_0001701 | Biological process | in utero embryonic development |
GO_0060009 | Biological process | Sertoli cell development |
GO_0001755 | Biological process | neural crest cell migration |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0045662 | Biological process | negative regulation of myoblast differentiation |
GO_0060221 | Biological process | retinal rod cell differentiation |
GO_0007165 | Biological process | signal transduction |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0060041 | Biological process | retina development in camera-type eye |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0014032 | Biological process | neural crest cell development |
GO_0046533 | Biological process | negative regulation of photoreceptor cell differentiation |
GO_0072034 | Biological process | renal vesicle induction |
GO_0010817 | Biological process | regulation of hormone levels |
GO_0045165 | Biological process | cell fate commitment |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0072289 | Biological process | metanephric nephron tubule formation |
GO_0007422 | Biological process | peripheral nervous system development |
GO_0014015 | Biological process | positive regulation of gliogenesis |
GO_0090190 | Biological process | positive regulation of branching involved in ureteric bud morphogenesis |
GO_0048709 | Biological process | oligodendrocyte differentiation |
GO_0060018 | Biological process | astrocyte fate commitment |
GO_0060612 | Biological process | adipose tissue development |
GO_0008584 | Biological process | male gonad development |
GO_0035914 | Biological process | skeletal muscle cell differentiation |
GO_0072197 | Biological process | ureter morphogenesis |
GO_0048469 | Biological process | cell maturation |
GO_0090184 | Biological process | positive regulation of kidney development |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0061138 | Biological process | morphogenesis of a branching epithelium |
GO_0045444 | Biological process | fat cell differentiation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005737 | Cellular component | cytoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
Gene name | SOX8 |
Protein name | Transcription factor SOX-8 |
Synonyms | |
Description | FUNCTION: Transcription factor that may play a role in central nervous system, limb and facial development. May be involved in male sex determination. Binds the consensus motif 5'-[AT][AT]CAA[AT]G-3' (By similarity). . |
Accessions | P57073 ENST00000293894.4 |