RFC5 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of RFC5 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	583.30	1445 / 1445	100%	22.30	183 / 183
bladder	100%	542.95	21 / 21	100%	23.34	503 / 504
uterus	100%	767.79	170 / 170	100%	33.62	458 / 459
breast	100%	616.40	459 / 459	100%	20.88	1115 / 1118
lung	100%	476.26	576 / 578	100%	21.32	1155 / 1155
ovary	100%	933.19	180 / 180	100%	21.95	428 / 430
brain	100%	453.01	2629 / 2642	100%	19.25	705 / 705
intestine	100%	621.93	966 / 966	99%	20.80	524 / 527
thymus	100%	742.19	653 / 653	99%	17.37	601 / 605
stomach	100%	493.74	359 / 359	99%	19.77	284 / 286
skin	100%	742.10	1808 / 1809	99%	16.73	467 / 472
prostate	100%	610.61	245 / 245	99%	11.68	495 / 502
pancreas	100%	380.02	328 / 328	98%	11.15	175 / 178
kidney	100%	474.84	89 / 89	96%	12.83	866 / 901
adrenal gland	100%	508.16	258 / 258	94%	10.57	216 / 230
liver	100%	440.73	226 / 226	92%	10.89	372 / 406
adipose	100%	518.71	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	27.88	29 / 29
spleen	100%	678.85	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	40.27	45 / 45
ureter	0%	0	0 / 0	100%	10.14	1 / 1
blood vessel	100%	441.43	1332 / 1335	0%	0	0 / 0
muscle	96%	210.96	770 / 803	0%	0	0 / 0
heart	94%	233.44	807 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	93%	8.63	74 / 80
peripheral blood	86%	665.62	800 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0032508	Biological process	DNA duplex unwinding
GO_1900264	Biological process	positive regulation of DNA-directed DNA polymerase activity
GO_0006281	Biological process	DNA repair
GO_0006260	Biological process	DNA replication
GO_0006261	Biological process	DNA-templated DNA replication
GO_0005663	Cellular component	DNA replication factor C complex
GO_0005654	Cellular component	nucleoplasm
GO_0031390	Cellular component	Ctf18 RFC-like complex
GO_0005634	Cellular component	nucleus
GO_0003677	Molecular function	DNA binding
GO_0019899	Molecular function	enzyme binding
GO_0003689	Molecular function	DNA clamp loader activity
GO_0005515	Molecular function	protein binding
GO_0017116	Molecular function	single-stranded DNA helicase activity
GO_0016887	Molecular function	ATP hydrolysis activity
GO_0005524	Molecular function	ATP binding

Gene name	RFC5
Protein name	RFC5 protein Replication factor C subunit 5 Replication factor C subunit 5 (Activator 1 36 kDa subunit) (A1 36 kDa subunit) (Activator 1 subunit 5) (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36)
Synonyms
Description	FUNCTION: The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. .
Accessions	P40937 ENST00000449641.6 ENST00000420967.5 F5H304 F5H0U6 ENST00000537315.5 C9JH72 F5H5S0 ENST00000454402.7 [P40937-1] ENST00000392542.6 [P40937-2] Q6LES9 ENST00000484086.6 ENST00000535092.1 E9PEP3

RFC5 report