Name | Number of supported studies | Average coverage | |
---|---|---|---|
naive B cell | 10 studies | 20% ± 5% | |
B cell | 9 studies | 21% ± 3% | |
natural killer cell | 7 studies | 20% ± 4% | |
plasmacytoid dendritic cell | 7 studies | 23% ± 8% | |
non-classical monocyte | 5 studies | 26% ± 7% | |
CD4-positive, alpha-beta T cell | 5 studies | 19% ± 3% | |
memory B cell | 5 studies | 17% ± 1% | |
classical monocyte | 4 studies | 22% ± 4% | |
smooth muscle cell | 4 studies | 18% ± 5% | |
epithelial cell | 4 studies | 36% ± 15% | |
endothelial cell | 4 studies | 23% ± 6% | |
CD8-positive, alpha-beta memory T cell | 4 studies | 19% ± 2% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 18% ± 2% | |
precursor B cell | 3 studies | 22% ± 5% | |
fibroblast | 3 studies | 17% ± 1% | |
CD8-positive, alpha-beta T cell | 3 studies | 19% ± 1% | |
dendritic cell | 3 studies | 34% ± 8% | |
pericyte | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2013.85 | 1445 / 1445 | 100% | 70.06 | 183 / 183 |
intestine | 100% | 1832.89 | 966 / 966 | 100% | 44.53 | 527 / 527 |
ovary | 100% | 1285.23 | 180 / 180 | 100% | 84.96 | 430 / 430 |
stomach | 100% | 1304.07 | 359 / 359 | 100% | 51.07 | 286 / 286 |
thymus | 100% | 1843.45 | 653 / 653 | 100% | 42.77 | 605 / 605 |
uterus | 100% | 1598.78 | 170 / 170 | 100% | 49.97 | 459 / 459 |
kidney | 100% | 1388.92 | 89 / 89 | 100% | 32.69 | 898 / 901 |
lung | 100% | 1550.52 | 577 / 578 | 100% | 50.57 | 1153 / 1155 |
prostate | 100% | 1334.44 | 245 / 245 | 100% | 31.24 | 500 / 502 |
breast | 100% | 1575.34 | 459 / 459 | 100% | 42.81 | 1113 / 1118 |
skin | 100% | 1790.45 | 1808 / 1809 | 100% | 42.64 | 470 / 472 |
bladder | 100% | 1601.43 | 21 / 21 | 99% | 42.39 | 501 / 504 |
adrenal gland | 100% | 1226.14 | 258 / 258 | 99% | 24.57 | 227 / 230 |
pancreas | 99% | 818.20 | 324 / 328 | 99% | 39.49 | 177 / 178 |
liver | 100% | 735.51 | 226 / 226 | 98% | 25.18 | 396 / 406 |
brain | 98% | 666.29 | 2587 / 2642 | 99% | 21.49 | 701 / 705 |
adipose | 100% | 1779.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2256.16 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 42.83 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 52.33 | 29 / 29 |
muscle | 100% | 1631.20 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1266.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.12 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 42.10 | 1 / 1 |
heart | 98% | 970.48 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1191.52 | 898 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071897 | Biological process | DNA biosynthetic process |
GO_0006275 | Biological process | regulation of DNA replication |
GO_0006338 | Biological process | chromatin remodeling |
GO_0006334 | Biological process | nucleosome assembly |
GO_0006261 | Biological process | DNA-templated DNA replication |
GO_0008622 | Cellular component | epsilon DNA polymerase complex |
GO_0008623 | Cellular component | CHRAC |
GO_0005721 | Cellular component | pericentric heterochromatin |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003887 | Molecular function | DNA-directed DNA polymerase activity |
GO_0003677 | Molecular function | DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CHRAC1 |
Protein name | Chromatin accessibility complex protein 1 (CHRAC-1) (Chromatin accessibility complex 15 kDa protein) (CHRAC-15) (HuCHRAC15) (DNA polymerase epsilon subunit p15) Chromatin accessibility complex subunit 1 |
Synonyms | CHRAC15 |
Description | FUNCTION: Forms a complex with DNA polymerase epsilon subunit POLE3 and binds naked DNA, which is then incorporated into chromatin, aided by the nucleosome remodeling activity of ISWI/SNF2H and ACF1. Does not enhance nucleosome sliding activity of the ACF-5 ISWI chromatin remodeling complex . . |
Accessions | ENST00000519533.1 ENST00000518971.1 H0YBP8 ENST00000220913.10 H0YBX4 E5RGS9 Q9NRG0 ENST00000519618.1 |